Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3846 ATGAAGATAGCAATAGAAGGATGCATGCATGGCGATTTAGACAATGTCTACAAAACCCTTCAACACCTCGAGAAAACTAATAACACCAAAATCGATCTTCTTCTCTGTTGCGGCGATTTTCAGGCCGTGAGGAACAAGAATGATTTGAAAAGCCTCAACGTACCAGACAAATTCCTCTCTATGAATTCCTTCTGGAAATACTATTCTGGCTTGGAGGTTGCTCCTTATCCTACTATCTTCATCGGTGGCAATCATGAAGCTTCTAATTATCTATGGGAACTGTACTATGGAGGATGGGCTGCACCTAATATTTTCTTTTTGGGAGCTGCTGGTGTGGTCAAGTTTGGGAATATACGAATTGGTGGACTCTCTGGAATTTATAAGCATCACGATTATAAATTAGGACACTTTGAGAGGCCTCCGTATAATCATAATACCATCAAGTCTGTGTATCATGTCCGTGAATATGACGTTCGCAAACTCATTCAAGTTAAGGAACCCATCGATATTTTTCTCTCACACGATTGGCCAGTGAGAATCACTGATCATGGGGATTGGGAGCAGCTTGTACGCCGGAAGCCTTACTTCCAGCAAGAGATAGAGGAAAAAAGACTTGGGAGTAAAGCTGCTGCTCAACTTCTAGAAAAATTGAAACCACAATACTGGTTTTCGGCACACTTACACTGTAGATTTGCTGCTCTTGTTCAACATGGGGAAGGAGGTCCTGTGACAAAATTCCTAGCACTTGATAAATGTCTTCCCGGGCGTGATTTCTTACAGGTTGTTGAAATTGAATCAGAGCCAGGACCTTATGAGATTCAGTATGATGAAGAATGGTTAGCAATAACACGGAATCTCAACTATGTATTCCCTTTGACACCCAAAGCTGCAGATTTTCGAGGTGTAAACTTTGAGATGGAAGATTGTCGCAAATGGGTTAAAAGCAAGCTACAAGAGAGGGGTTGTAAACCTCCTGAATTTGTTAGAACGGTTCCATGTTATGATCCTTCTCAAGCCGATGTTAACGGGGATTCTTCTGTGAATCCTCGGAATCCCCAGACAGAATATCTTTTGCGACTTCTGGAACTTCCATATCTTCTTGATAGAAATTCTGAAGGAAAGGACGTGTCACCTTATTCTTCTTTAATTCCAAGAGGCCCTGCTGATAATAATAGCGAGGACATTCCCATTGATGATGTGGATGATGACGATGATGAGGGGCTCCCAACTGAGACTACAAGAGTAGTACAAAAAACACCCTGCACACTCCAGGCACTGTTTTTGAATCCTAAAAAAAGGACTAAACGCTTGGTTCCCATGGAGACAACAAAATCAATGTTTCTTTTCATAGCAGTTTCTATCTTGTTTGTTTCCTCTGTAACTGCTAATCTTGCTTTCGACTTCTATGCTGCTTCATGTCCAACAGCAGAGTTATTCATAAGAAATGCAGTCAGTACATCCTCTTCAAATGATCCTTCCATTCCTGGAAAGCTCCTTCGCATGGTTTTCCATGATTGCTTCGTAGAGGGATGTGATGCATCTTTGATGCTACAAGGGAATAATACAGAACAAAGTGATCCAGGAAACAGATCTGTTGGTGGATTTTCTGTTATAGAAACAGCGAAAAGAGTTCTTGAGATGTTCTGCCCAGGAACTGTTTCTTGTGCAGACATAATTGCTCTAGCAGCTAGAGATGCAGTTGAAATTGCTGGTGGACCAAGGGTTCAGATTCCTACAGGTAGGAGAGATGGAATGGTTTCAATTGCTTCAAATGTTAGACCCAACATTGTGGACACTAGTTTTACTATGGACGAGATGCTTAAGCTCTTTTCCAGTAAAGGATTGTCCTTACTTGATCTTGTGGTTCTTTCAGGGGCTCATACAATAGGAACAGCTCATTGCAATACATTCAGGGGTCGTTTCCAACAAGACAGAAATGGAAGTCTTAGGCTCATTGACCAAACCATTGATACTAATTATGCTGATCAGCTAATAAAACAGTGTCCAATAAATGCACAACCATCCGTGGCAGTGAACATCGATCCTGAAACATCTATGCTATTTGACAACCAATACTACAGAAATCTTCTTGATCGCAAAGTTCTGTTCCAGTCTGATTCGGTTTTGATGAACAATGATGACACGAGGAAACTAGTGGAGGATTTTGCAAATGATCAAGAACTTTTCTTTGACAATTGGGGTGTGTCGTTCGTAAAGCTAACCAGTATTGGGGTAAAAACTGACGAGGAGGGTGAAATTCGACGTTCTTGTGCTGCAACTAATATTGTATAA 2292 0.4119 MKIAIEGCMHGDLDNVYKTLQHLEKTNNTKIDLLLCCGDFQAVRNKNDLKSLNVPDKFLSMNSFWKYYSGLEVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIFFLGAAGVVKFGNIRIGGLSGIYKHHDYKLGHFERPPYNHNTIKSVYHVREYDVRKLIQVKEPIDIFLSHDWPVRITDHGDWEQLVRRKPYFQQEIEEKRLGSKAAAQLLEKLKPQYWFSAHLHCRFAALVQHGEGGPVTKFLALDKCLPGRDFLQVVEIESEPGPYEIQYDEEWLAITRNLNYVFPLTPKAADFRGVNFEMEDCRKWVKSKLQERGCKPPEFVRTVPCYDPSQADVNGDSSVNPRNPQTEYLLRLLELPYLLDRNSEGKDVSPYSSLIPRGPADNNSEDIPIDDVDDDDDEGLPTETTRVVQKTPCTLQALFLNPKKRTKRLVPMETTKSMFLFIAVSILFVSSVTANLAFDFYAASCPTAELFIRNAVSTSSSNDPSIPGKLLRMVFHDCFVEGCDASLMLQGNNTEQSDPGNRSVGGFSVIETAKRVLEMFCPGTVSCADIIALAARDAVEIAGGPRVQIPTGRRDGMVSIASNVRPNIVDTSFTMDEMLKLFSSKGLSLLDLVVLSGAHTIGTAHCNTFRGRFQQDRNGSLRLIDQTIDTNYADQLIKQCPINAQPSVAVNIDPETSMLFDNQYYRNLLDRKVLFQSDSVLMNNDDTRKLVEDFANDQELFFDNWGVSFVKLTSIGVKTDEEGEIRRSCAATNIV* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3846 763 Gene3D Peroxidase, domain 2 597 740 - -
Mtr3g3846 763 Pfam Peroxidase 481 725 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3846 763 Pfam Lariat debranching enzyme, C-terminal domain 243 364 IPR007708 GO:0006397|GO:0016788
Mtr3g3846 763 SMART DBR1_2 235 367 IPR007708 GO:0006397|GO:0016788
Mtr3g3846 763 Gene3D - 467 761 - -
Mtr3g3846 763 CDD MPP_Dbr1_N 3 259 IPR041816 -
Mtr3g3846 763 ProSiteProfiles Plant heme peroxidase family profile. 463 761 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3846 763 MobiDBLite consensus disorder prediction 372 407 - -
Mtr3g3846 763 ProSitePatterns Peroxidases proximal heme-ligand signature. 619 629 IPR019793 -
Mtr3g3846 763 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 391 - -
Mtr3g3846 763 PRINTS Plant peroxidase signature 473 492 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g3846 763 PRINTS Plant peroxidase signature 497 517 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g3846 763 PRINTS Plant peroxidase signature 533 546 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g3846 763 PRINTS Plant peroxidase signature 552 562 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g3846 763 PRINTS Plant peroxidase signature 571 586 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g3846 763 PRINTS Plant peroxidase signature 618 630 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g3846 763 PRINTS Plant peroxidase signature 679 694 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g3846 763 PRINTS Plant peroxidase signature 695 712 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g3846 763 PRINTS Plant peroxidase signature 735 748 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g3846 763 SUPERFAMILY Heme-dependent peroxidases 464 761 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr3g3846 763 Gene3D - 8 245 IPR029052 -
Mtr3g3846 763 PRINTS Haem peroxidase superfamily signature 495 509 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3846 763 PRINTS Haem peroxidase superfamily signature 553 570 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3846 763 PRINTS Haem peroxidase superfamily signature 571 583 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3846 763 PRINTS Haem peroxidase superfamily signature 619 634 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3846 763 PRINTS Haem peroxidase superfamily signature 681 696 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3846 763 SUPERFAMILY Metallo-dependent phosphatases 1 253 IPR029052 -
Mtr3g3846 763 CDD secretory_peroxidase 463 760 IPR033905 GO:0004601|GO:0042744
Mtr3g3846 763 Pfam Calcineurin-like phosphoesterase 1 229 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3846 Mtr-Chr3 52253462 52261507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3846 454 761 Peroxidase AT4G31760 61.093 3.14e-140 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3846 K18328 - mnt:21390548 1016.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3846 3 52253462 52261507 Mtr3g3846 3 52253462 52261507 ECH