Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3842 ATGGGATATCTCAATTCAGTTTTGTCCTCAACAAGTCAGGTCCGTGCTATAGATGATGGACCGGTCAGCGGTGGCGGTCTCAGTCACAATGGAAAGTTTAGCTATGGGTATGCTAGCTCGCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACCAGAATTGACGGTGTCGATGGTGAAATCGTTGGCCTTTTTGGAGTCTTTGATGGTCATGGCGGTGTTCGTGCTGCTGAGTATGTTAAGCAAAACTTGTTTAGCAATTTGATCAGTCACCCAAAATTCATATCTGACACCAAATCAGCAATAACTGATGCATACAATCATACCGACAATGAATATCTGAAATCAGAAAACAACCATCACAAAGATGCAGGATCTACTGCATCTACCGCCATTCTAGTTGGTGATCGTTTGCTTGTTGCAAATGTTGGAGACTCCAGGGCCGTTATATGCAGGGGCGGTAATGCAATTGCTGTTTCTCGAGATCATAAGCCAGACCAAACTGATGAGAGGCAAAGGATTGAAGATGCAGGAGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTCTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGGAAGAAAAAGTTGACAGTTCTCTTGAGTTTCTTATTCTGGCCAGTGATGGGCTATGGGATGTCGTCTCAAATGAGGAAGCTGTTGGTATGATTAAACCTATTGAAGATGCAGAGGAGGCAGCAAAGAGACTGATGCAAGAAGCATATCAGAGAGGTAGTGCTGACAATATCACTTGTGTCGTTGTTCGTTTCTTGATGAACCAAGGCACTTCTTCTCATAGTAGCTCCAACCAATTTGCCGGCCACAGTTAG 900 0.4422 MGYLNSVLSSTSQVRAIDDGPVSGGGLSHNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGVRAAEYVKQNLFSNLISHPKFISDTKSAITDAYNHTDNEYLKSENNHHKDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVGMIKPIEDAEEAAKRLMQEAYQRGSADNITCVVVRFLMNQGTSSHSSSNQFAGHS* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3842 299 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Mtr3g3842 299 SMART PP2C_SIG_2 29 280 IPR001932 -
Mtr3g3842 299 SUPERFAMILY PP2C-like 29 280 IPR036457 -
Mtr3g3842 299 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 296 - -
Mtr3g3842 299 SMART PP2C_4 24 278 IPR001932 -
Mtr3g3842 299 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Mtr3g3842 299 CDD PP2Cc 33 280 IPR001932 -
Mtr3g3842 299 Pfam Protein phosphatase 2C 63 273 IPR001932 -
Mtr3g3842 299 Gene3D - 26 285 IPR036457 -
Mtr3g3842 299 PANTHER ALPHABET, ISOFORM E-RELATED 3 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3842 Mtr-Chr3 52220285 52223997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3842 1 295 PP2C-type Phosphatase Gene Family AT4G31750 88.475 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3842 K17506 - gmx:547661 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3842 3 52220285 52223997 Mtr3g3842 3 52220285 52223997 ECH