Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3834 ATGAACATAGAGTATAATCCAATATTTTTGAAATTCATGGTTTGTTGTTGGTGTCTAGTTATTCTTTTGGGTGGAATATTGGCACAAATTACTAAAAATGAGAGTAATATTGTAGTGAAAGTGGGAGCTGTAATTGATGTTAGCAGTAATGGAACGGTTGGGAAAATAGGATTGAGCTGCATAAACATGTCTCTTTCAGATTTCTATCTTTCTCATTCTCATTACAAAACCAGAATTCAACTCATCCTTAGGGATTCCCATAAGGACGTCGTCTCTGCCGCTGCACACGCTTTGGATCTCATTAAAAATGAAAAAGTGCAAGCCATAATGGGGCCAATAACAACAATAGAAACAAATTTCGTGATTCAACTAGGAGACAAAGCTCACGTGCCCATTGTAACATTTTCAGCAACAAGCCCTTCACTTGCATCACTTCAAAGTTCATACTTCTTTCAAATATCACAAAATGATTCAACTCAAGTTAAAGCAATCACCTCAATTATCCAAGCTTTTGGATGGAAACAAGTGGTTCCCATTTATGTAGACAATAGTTTTGGTGAAGGACTTATTCCTTATTTAACTAGTGTTCTACAACAAGCCTATATACAAGTTCCCTATCTAAGTGCAATTTCTCTTTCAGCCAATGATGATGCTATCACTCAAGAACTTTATAAAATAATGACTACTATACCCGCTAGAGTATTTATTGTGCACATGTCACCAAGTCTTGGCTCTAAACTTTTTACCTTAGCAAAAAAAATTGGGATGATGAATCAAGGCTATGTTTGGATAGTAACCGATGGTATGGCCAATTTGTTTAATTCATTGAGTTTTAATGTGAGGGAATCAATGGAAGGAGTGTTGGGTCTTAGGACTTATATTCCTAGAACAAAAAAACTAGATGATTTTAGGGTTAGATGGAAAAGGAAATTCATAAGTGACAATCCAAAACTTGTTGACACAAATTTGAACATTTTTGGAATATGGGCTTATGATGCTACAATTGCATTAGCAATGGCTATTGAGAAAGTTGGAATTGGAAACACCAAATTTGATTACAATGAGAGTAAAACATCAAGCAATTATTACATGCCTAATTTTGAAAAGTTTGGTATTTCACAAAATGGTGAGAAATTGAGTGAAGCTTTGTCAAACACTAGATTTAATGGTCTTAGTGGTGATTTCAATGTTGTTGGTGGGAAGTTACAAGCATCAATATATGAAATAATTAATGTGATTGGTGATGGTGAAAAGAGAGTTGGATTTTGGACACCAGATAAAGGGTTGTCTAGAAATTTGGATACAGAAGGCCTAATAAGAAGCAATAATAGCATATATTCTACTTCTAAAAATGATCTTGGATTAATCATGTGGCCAGGGGATATGAACTCTATTCCAAAGGGATGGGAAATTCCTACTATTGGGAAGAAATTGAGAATAGGGGTTCCGGTGAAAAATGGAGATAACTACACTGAATTTTTGCATATAACGCGTGATCATAGTACTAATTCAACACTAGCCACTGGCTTCTGCATTGATGTCTTCAAAGCTGTGGTGGAAGTGTTGCCTTATGCATTGCCATATGAATTTGTTCCATTTGCAAAGTCTGATGGTGAGATGGCAGGAACCTACAATGATTTGATCACTCAACTTTATTATGGGAACTTTGATGCGGTGGTGGGGGATGTAACAATCATCGCGAACAGGTCCGACTATGTTGATTTCACCATGCCATACACAGAATCTGGTGTGACAATGGTTGTTCTAATGAAAGACAACAGAAAGAAAAATGCATGGGCCTTTCTGAAACCACTCACGTGGGATCTTTGGGTAACAACAGCTTGTTCATTTGTGTTCATTGGATTTGTTGTATGGGTCCTTGAACATAGAATAAACAAAGATTTCAGGGGACCTACCTCTCATCAGATTGGTACTAGCTTATGGTTTTCCTTTTCAACTATGGTCTTTGCTCAAAGAGAGAGAGTAGTGAGTAACTTGGCAAGATTTGTGGTGGTTGTATGGGTTTTTGTGGTTCTAATTCTGGTTCAGAGTTACACTGCAAGCTTGACTTCACTTTTAACAGTTGAACAACTAAGGCCAGCTATTACAGACGTTAACCAACTTCTAAAGAATAAGATGAATGTCGGCTATCTCAAAGGTTCTTTTGTTTATGGAATCTTGAAGGAAATGAATTTCCAAGATTTTCAGCTCATTACCTATCAATCACCTAAAGAATGTAACGAGCTTTTCATAAAAGGAAGTGCAAATGGTGGTATTGATGCTGCTTTTGATGAAGTTCCCTATGTCAAGCACTTTCTTGGAATTTATAGTTGTTCTTCTTCAAAGTATGCCATGGTTGAACCAAGATTTAAAACTGGTGGTTTTGGCTATGCATTCCCAAAAGGTTCACCTCTGGTAGCAGACATTTCAAGGGCAATCCTAAATGTGACTCAAGGAGGCAAAATGAGAACAATTGAGAATGCATGGTTCAAAGAAAGTCGTTGTCTAGATTCTAATACAGAAATTTCCTCTAATAATAGTCTTGGCCTTGAAAGCTTCTGGGGTCTTTTTCTGATAGCAGGGATTGCTTCCCTATTAGCACTCCTAATCTTTGTGGTAACATTTCTACATCAGCACAAACACATTTGGTTAAACAATAATCCAAGTAATTCAATATGGAGACGAATTGAAGTCGTGTTTAGGATGTTTGATCAAAGAGACTTGAGTAGTCACACATTCAAGAAAACAGAAAATATAAATGAAAGCAGTAATAATCCTTATCATCATGATGATTTAGGTGCTGTTGAGGTCTCTCCAGGCACACCTTATCCACCTAGTCCATTTAGTCAAACTGAATCAAATGTTTCCTTCTATGGAGATTTTAGTCAAAACATAGATATGGATGTCATGCAAATTACTAATCCAGAAGTTTCCCCTGTGAACAACTGTGAAATTAACTCCCAAGCAACATGA 2973 0.3656 MNIEYNPIFLKFMVCCWCLVILLGGILAQITKNESNIVVKVGAVIDVSSNGTVGKIGLSCINMSLSDFYLSHSHYKTRIQLILRDSHKDVVSAAAHALDLIKNEKVQAIMGPITTIETNFVIQLGDKAHVPIVTFSATSPSLASLQSSYFFQISQNDSTQVKAITSIIQAFGWKQVVPIYVDNSFGEGLIPYLTSVLQQAYIQVPYLSAISLSANDDAITQELYKIMTTIPARVFIVHMSPSLGSKLFTLAKKIGMMNQGYVWIVTDGMANLFNSLSFNVRESMEGVLGLRTYIPRTKKLDDFRVRWKRKFISDNPKLVDTNLNIFGIWAYDATIALAMAIEKVGIGNTKFDYNESKTSSNYYMPNFEKFGISQNGEKLSEALSNTRFNGLSGDFNVVGGKLQASIYEIINVIGDGEKRVGFWTPDKGLSRNLDTEGLIRSNNSIYSTSKNDLGLIMWPGDMNSIPKGWEIPTIGKKLRIGVPVKNGDNYTEFLHITRDHSTNSTLATGFCIDVFKAVVEVLPYALPYEFVPFAKSDGEMAGTYNDLITQLYYGNFDAVVGDVTIIANRSDYVDFTMPYTESGVTMVVLMKDNRKKNAWAFLKPLTWDLWVTTACSFVFIGFVVWVLEHRINKDFRGPTSHQIGTSLWFSFSTMVFAQRERVVSNLARFVVVVWVFVVLILVQSYTASLTSLLTVEQLRPAITDVNQLLKNKMNVGYLKGSFVYGILKEMNFQDFQLITYQSPKECNELFIKGSANGGIDAAFDEVPYVKHFLGIYSCSSSKYAMVEPRFKTGGFGYAFPKGSPLVADISRAILNVTQGGKMRTIENAWFKESRCLDSNTEISSNNSLGLESFWGLFLIAGIASLLALLIFVVTFLHQHKHIWLNNNPSNSIWRRIEVVFRMFDQRDLSSHTFKKTENINESSNNPYHHDDLGAVEVSPGTPYPPSPFSQTESNVSFYGDFSQNIDMDVMQITNPEVSPVNNCEINSQAT* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3834 990 Gene3D - 372 478 - -
Mtr3g3834 990 Gene3D - 479 597 - -
Mtr3g3834 990 SUPERFAMILY Periplasmic binding protein-like I 38 470 IPR028082 -
Mtr3g3834 990 Pfam Receptor family ligand binding region 60 414 IPR001828 -
Mtr3g3834 990 CDD PBP1_GABAb_receptor_plant 40 433 IPR044440 -
Mtr3g3834 990 SUPERFAMILY Periplasmic binding protein-like II 454 833 - -
Mtr3g3834 990 Gene3D - 598 730 - -
Mtr3g3834 990 Pfam Ligand-gated ion channel 832 863 IPR001320 GO:0015276|GO:0016020
Mtr3g3834 990 PANTHER GLUTAMATE RECEPTOR 2.9 39 927 - -
Mtr3g3834 990 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 39 927 - -
Mtr3g3834 990 Pfam Bacterial extracellular solute-binding proteins, family 3 507 831 IPR001638 -
Mtr3g3834 990 CDD GluR_Plant 476 830 - -
Mtr3g3834 990 Gene3D - 158 322 - -
Mtr3g3834 990 SMART GluR_14 479 832 IPR001320 GO:0015276|GO:0016020
Mtr3g3834 990 PIRSF IGluLR_plant 9 936 IPR017103 -
Mtr3g3834 990 Gene3D - 731 837 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3834 Mtr-Chr3 52163442 52168857 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3834 6 947 Ion Channels AT2G29120 49.736 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3834 K05387 - tcc:18587654 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3834 3 52163442 52168857 Mtr3g3834 3 52163442 52168857 ECH