Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3832 ATGGAAAAAGAGTGTGTTGAGGATATTATGGAAATTGAAGTCCTTCCTTCAATGTGGCCAGAAGATATTGGAGCTGATGTTGGAAAGCAGTTCAATATAGAAAAGCCAGGAAATGATCAAGATGTGTTAGAAGAAGTATCAATCATAGATGAAGTTACAACTATAGCTGATTTCAAGCGTCTCATTGAGCTCACGAATTTCACAGAAAAAGGTTCTTCTCAATTAGCCTATCTTATGAAACATTGGGAGTATAAGCAGGCGAGCGTGGCGCGTCTTCTAAGAGAAGAACTCGACAACCTAAACAAACAAAGACAGGATGTTGAGCTAAGGAAGTTGGAGATATTGGAAGAGCATAGATTTGAGGACGAAAGATATGGAGGAGATAAACGACCGGTTTCTATATTGGATGATATTTATGATATATGGCAACAAGACGTGCCTTGCAGAAAAAGTAATGTTGTTGTACAAAATAAGAGAGTTGAAATTGATGCCGAGTATGATACTGTTGTGTACTGGAAACAGCGAGCGATGCACTTGGAAAAGTTGTTGGAGGCAAGTATTCAAAGAGAAGAGACACTTGAACAAAAGTTAAAAGAAAGTATCAAGAACATTGAAAGACAATCATCACCTGTTGAAGAACTCTCTCAAATTCTGAAGAGAGCAGATAATTTCTTGCATTTTATACTCCAAAATGCTCCTGTTGTTATTGGCCATCAGGACAAAGAGTTGCGGTATCGCTTTATCTACAACCACTTTCCAAGTTTGCATGAGGAGGACATAATAGGAAAAACTGATGTCGAAATATTCACTGGATCTGGTGTTAAGGAGAACCAAGATTTTAAGAGGGAAGTTTTGGAAAAAGGATTGCCTGCAAAAAGGGAAATCACTTTTGAGACAGAACTATTTGGATCAAAGACATTCTTGATTTATGTAGAACCTGTATTCAGCAAGGCAGGTGAAACAATTGGAATCAATTACATGGGAATGGATGTAACCGATCAGGTTAGAAAAAGAGAAAGGATGGCGAAGATTCGCGAAGAGATTGCTGTTCAGAAAGCAAAGGAAACAGAACTGAATAAAACCATTCACATTACAGAGGAAACTATGAGAGCAAAGCAAGTGCTGGCAACAATGTCACATGAGATAAGATCTCCACTTTCTGGTGTTGTTAGCATGGCTGAAATTCTTTCCACCACAAAACTTGATAAGGAGCAAAGACAGCTTTTGGATGTCATGTTGTCATCTGGAGATTTGGTTCTTCAACTCATAAATGACATACTTGATCTTTCCAAGGTTGAATCAGGAGTTATGAAGTTGGAAGCTACCAAATTTCGACCTAGAGAGGTAGTAAAGCATGTGCTTCAGACAGCCGCAGCATCATTGCAGAAAATATTAACCATAGAAGGACATGTAGCAGATGATGTACCTATAGAGGTCATTGGTGATGTTTTAAGGATTCGGCAAATTCTCACAAATTTAACCAGCAATGCCATCAAATTTACAAATGAAGGCAAAGTAGGGATAAACCTTTATGTTGTGCAAGAGCCAAGTTTTACAAAATCTGGAAGCGTACAAAAGATTAGTTCAGGCTATTCAACCATTTCTGTGAATGTAGTGAAAGAAGAAAGATATGGAGTTAATGATGAGTGTATATCTCTGGTTAAGAGTGAATGCTCGATGAACGGAGACACAGAGGATCAACATCACTCAAATGAAACAACAGTGTGGATAGGTTGTGATGTATATGATACAGGCATTGGAATACCAGAAAATGCAATACATAGTTTATTCAAAAGGTACATGCAAGTCAGTGTAGATCACGCTCGAAAGTATGGTGGGACAGGGCTAGGACTAGCAATATGCAAACAACTGGTTGAGTTGATGGGAGGTCGTTTAACAGTGTCTAGCAAAGAACAAAATGGTTCTACCTTCACATTCATACTTCCATACAAGGTCTCGATCGCTTGCGATAGTTCTGATTACTCAGATGAATTCTCAGACATGGAGCATAATGATGCAACTTCTGATGATACAACAACAGAAGGTTTCTTCCAATTCCAACCTCCCAATTTAGGCCATATAGTCTCTTCCGGTGGAGCAAACAGAACTCACAACAAGTTATTGTCGCACAAATTTTGTGGATTTTCTGAGAGTTCATTCTCATTTCCCTCTACTTCCAATGACAACATATCAAAAGGAACATGTTCAGTTGATGATTCATCTTCATTGGTTGATGATTCAGATATGTCTGAATCTGCTAGTTCATCTAGCCACAAACATCATCTATATAATGCTCATGCATGGTTCCAGAATGGTATTGCAGATTCTTCTCAGCACATGGTGGTAAACTCAACTACTCAATGTGCTTCTAGCAATAGTAAATCAGAAGTAACCAAATCCATATCAAAGCCTAAGATCCTTCTTGTTGAAGATAACAAGATTAACATCATGGTGACACAATCCATGATGAAACAGTTGGGTCATAACATAGATGTTGTCAATAATGGAGCAGAGGCGGTGCGTGCGGTTCAGCGCTGTACATATGACCTGGTTCTGATGGATGTGTGCATGCCAATTATGGATGGTCTTCAAGCAACAAAACTAATTCGGTCTTTCGAGGAAACAGGCAATTGGGATGCTGCAAAAAATGCCGGAATCGAGCAAAGTCTACCCAATCGAGATTATGAATATTCCGCTCCATCTAAAAAGCGAGTTCCCATTGTTGCGATGACAGCAAATGCTTTGTCAGAGAGTGCTGAAGAATGTTTTGCTAATGGTATGGACTCATTTGTGTCAAAACCTGCGAGTTTACGAAAATTGAAAGAGTGTATTGAACAATACTTAAGGTGA 2850 0.3888 MEKECVEDIMEIEVLPSMWPEDIGADVGKQFNIEKPGNDQDVLEEVSIIDEVTTIADFKRLIELTNFTEKGSSQLAYLMKHWEYKQASVARLLREELDNLNKQRQDVELRKLEILEEHRFEDERYGGDKRPVSILDDIYDIWQQDVPCRKSNVVVQNKRVEIDAEYDTVVYWKQRAMHLEKLLEASIQREETLEQKLKESIKNIERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLHEEDIIGKTDVEIFTGSGVKENQDFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMDVTDQVRKRERMAKIREEIAVQKAKETELNKTIHITEETMRAKQVLATMSHEIRSPLSGVVSMAEILSTTKLDKEQRQLLDVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKILTIEGHVADDVPIEVIGDVLRIRQILTNLTSNAIKFTNEGKVGINLYVVQEPSFTKSGSVQKISSGYSTISVNVVKEERYGVNDECISLVKSECSMNGDTEDQHHSNETTVWIGCDVYDTGIGIPENAIHSLFKRYMQVSVDHARKYGGTGLGLAICKQLVELMGGRLTVSSKEQNGSTFTFILPYKVSIACDSSDYSDEFSDMEHNDATSDDTTTEGFFQFQPPNLGHIVSSGGANRTHNKLLSHKFCGFSESSFSFPSTSNDNISKGTCSVDDSSSLVDDSDMSESASSSSHKHHLYNAHAWFQNGIADSSQHMVVNSTTQCASSNSKSEVTKSISKPKILLVEDNKINIMVTQSMMKQLGHNIDVVNNGAEAVRAVQRCTYDLVLMDVCMPIMDGLQATKLIRSFEETGNWDAAKNAGIEQSLPNRDYEYSAPSKKRVPIVAMTANALSESAEECFANGMDSFVSKPASLRKLKECIEQYLR* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3832 949 PRINTS Bacterial sensor protein C-terminal signature 577 591 IPR004358 GO:0016310|GO:0016772
Mtr3g3832 949 PRINTS Bacterial sensor protein C-terminal signature 612 630 IPR004358 GO:0016310|GO:0016772
Mtr3g3832 949 PRINTS Bacterial sensor protein C-terminal signature 636 649 IPR004358 GO:0016310|GO:0016772
Mtr3g3832 949 CDD HisKA 369 431 IPR003661 GO:0000155|GO:0007165
Mtr3g3832 949 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 562 948 - -
Mtr3g3832 949 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 1 542 - -
Mtr3g3832 949 SMART REC_2 804 944 IPR001789 GO:0000160
Mtr3g3832 949 Coils Coil 90 117 - -
Mtr3g3832 949 Pfam His Kinase A (phospho-acceptor) domain 373 435 IPR003661 GO:0000155|GO:0007165
Mtr3g3832 949 SMART HisKA_10 370 435 IPR003661 GO:0000155|GO:0007165
Mtr3g3832 949 Pfam Response regulator receiver domain 806 873 IPR001789 GO:0000160
Mtr3g3832 949 SUPERFAMILY CheY-like 802 949 IPR011006 -
Mtr3g3832 949 Gene3D - 436 655 IPR036890 -
Mtr3g3832 949 Gene3D PAS domain 211 347 - -
Mtr3g3832 949 Coils Coil 176 207 - -
Mtr3g3832 949 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 650 IPR003594 -
Mtr3g3832 949 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 368 435 IPR036097 GO:0000155|GO:0007165
Mtr3g3832 949 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 1 542 - -
Mtr3g3832 949 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 562 948 - -
Mtr3g3832 949 CDD REC_hyHK_CKI1_RcsC-like 806 944 - -
Mtr3g3832 949 ProSiteProfiles Response regulatory domain profile. 805 948 IPR001789 GO:0000160
Mtr3g3832 949 Gene3D - 798 949 - -
Mtr3g3832 949 Gene3D - 357 435 - -
Mtr3g3832 949 CDD HATPase_EvgS-ArcB-TorS-like 486 649 - -
Mtr3g3832 949 ProSiteProfiles Histidine kinase domain profile. 377 652 IPR005467 -
Mtr3g3832 949 SMART HKATPase_4 481 652 IPR003594 -
Mtr3g3832 949 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 424 650 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3832 Mtr-Chr3 52146807 52151837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3832 1 948 Histidine Kinase Gene Family AT5G10720 58.574 0.0 1095
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr3g3832 HATPase_c 3.7e-26 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3832 - - gmx:100811117 1432.54