Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3823 ATGGGTGGTGAGGGTAGAGTTGAAGTTGTGAGTGGCAAAGGGTGTTCGAGGCTGTTTTCGTCTTCAATCAGAAATCTTCAACCATTGGACCAAATGTCTCCTGTTTCATCCTCTCCGCAATTGCCATCAAATGCTCCTTTTGCTGGTCTTGTTATATGTGTTACTGGTTTATCTAAAGAAGCAAGGAATCAGGTCATGGAGGCTACAGAGAGATTAGGTGGCCAGTATAGCCCCAATCTGCATCCTCAATGTACTCATTTGGTGGTTCAGAGTTTTGGTGGACGCAAATTTGAGCATGCGCTGAAGCATGGAACAAAAAATGGTCTCTTTGTTGTCACACTGGGTTGGTTTGTGGATAGTGTCAGGAAAAATGTAAGGTTGACCGAATCACTTTATAGTTTGAAGAGTTATGGGGATAACGATATGAAGTTGGATGATTTTAGACTGCTTCCCGGGTACACAAATGCTGGAAATTGTCTTCCTGCAAGAATCCATGAAATCAAGCATACTCATCATGCTGAAGAATTTCGAAGATTCTCTGGTGCAGAGTCTAACAGAAGTTTGGACTCAAGTTTGTCTGGTTGCTCCATCTACGTTGATCCAGGCATTTCATCCGAATTGCAGAACAAGGTTGCTGAAACTGCATCCAGAGAAGGTGCTAGTTTGGCAGACCAATGGTTTGTTGGCTGTAATGTTAGTCATGTAGTCACTGAAGGGACATCCATTCAAAGATATCTTGGATACTCTAGTAACCTCATTACACCAGTGTGGATTCTCAAAACAGCTAAGGAGAAACAAGTACAAAGGCTTGTTAGCATGTCTGTTGATTTGGCAAGACAAGTTGGCCTGATGCTTGATGACATTTCAGGAAAGGAAATAGTAAAGCAAAAAGTCCATGATGATCTTCAGGGAAGTAAAAGTGAAATTGGTTGCAAAGAAAGACAACAAATTGTAAATTCAGCGAAAAATGGTGTCAGAAGTCGCCGTGGTCGTCGAATGCAGACTTGTCAGACTCCGATCCGTCCGATTACACCCAATAACCTTCTGGACTCTATCTGTTGGTCAATATCGGAAGCAACTTCAACTGCTTCCATTTACACAGACTCTTTCAGTGCTGAAGATCCTAGTGAAAATCATACCTCAATATTTTTTGATGCAAAAGGGGATGGGAAGGATTCAGATGCTTCATTTTCACACTCCACACGTCCTCTAACAGAAAGTGAGAAGTCCGAGTTGATATTTAAAAACCATTTTCTCACCATACTCTTCCCTGTGGACCGGTTTTCCGAGATCGGCCCTTCCACAAGAACGTTGTTCAGCCATAACGGTTTTACATGTCTTCAGGTGTTGGATCATATCCATGCATTTTATCAGGAGAACATGTCAAGCCTTGAAATAGATGTGGCGATTCATACAGATTCAAGACATGCGGACAGGCTTCGATCAGTTTACTCAAGTAAGGAAACAGCGGAGCGTGGGTATGTGATGTTGAAACGAATTGAATTTTTGGGTAGTCGTACGAGTTTTGAAATGTTGAAGCGCGTGAGTGGAGACAACAACTCCAATGTGTATGAGTTATTACTTAGGGCATAA 1593 0.4218 MGGEGRVEVVSGKGCSRLFSSSIRNLQPLDQMSPVSSSPQLPSNAPFAGLVICVTGLSKEARNQVMEATERLGGQYSPNLHPQCTHLVVQSFGGRKFEHALKHGTKNGLFVVTLGWFVDSVRKNVRLTESLYSLKSYGDNDMKLDDFRLLPGYTNAGNCLPARIHEIKHTHHAEEFRRFSGAESNRSLDSSLSGCSIYVDPGISSELQNKVAETASREGASLADQWFVGCNVSHVVTEGTSIQRYLGYSSNLITPVWILKTAKEKQVQRLVSMSVDLARQVGLMLDDISGKEIVKQKVHDDLQGSKSEIGCKERQQIVNSAKNGVRSRRGRRMQTCQTPIRPITPNNLLDSICWSISEATSTASIYTDSFSAEDPSENHTSIFFDAKGDGKDSDASFSHSTRPLTESEKSELIFKNHFLTILFPVDRFSEIGPSTRTLFSHNGFTCLQVLDHIHAFYQENMSSLEIDVAIHTDSRHADRLRSVYSSKETAERGYVMLKRIEFLGSRTSFEMLKRVSGDNNSNVYELLLRA* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3823 530 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 3 530 - -
Mtr3g3823 530 ProSiteProfiles BRCT domain profile. 187 275 IPR001357 -
Mtr3g3823 530 SUPERFAMILY BRCT domain 41 135 IPR036420 -
Mtr3g3823 530 Pfam twin BRCT domain 50 116 IPR001357 -
Mtr3g3823 530 Gene3D BRCT domain 45 136 IPR036420 -
Mtr3g3823 530 ProSiteProfiles BRCT domain profile. 42 134 IPR001357 -
Mtr3g3823 530 CDD BRCT_TopBP1_rpt2_like 46 124 - -
Mtr3g3823 530 Pfam Family of unknown function (DUF6699) 354 514 IPR046522 -
Mtr3g3823 530 SMART BRCT_7 44 124 IPR001357 -
Mtr3g3823 530 SMART BRCT_7 189 265 IPR001357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3823 Mtr-Chr3 52055455 52060033 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3823 39 134 Core DNA Replication Machinery Family AT1G77320 37.113 8.08e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3823 - - gmx:100815253 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3823 3 52055455 52060033 Mtr3g3823 3 52055455 52060033 ECH