Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3819 ATGATGCACATGACTTTCTACTGGAGCAAAAAAGTGACACTCCTTTTCGATTCATGGAAAACCGATTCATGGACGAGTTATGCACTGAGTCTACTCGCTTGTCTCATCGTTTCAATTTTCTATCAATTTCTTGAAAATCGCCGAATTCGTCTCAAGCTGTTAGCCTCCGGGAAGCCGTTTCCGGCGGCGATCGAAGCTCCTCTTCTACGACGGACGTTTGCCGGAAGTGGAGCTAAATTAGGCGTGAGAGTTGCCGGAGCTGTTCTGTTTGGATTGAGCTCGGCGATCGGGTATTTCTTGATGTTGTCTGTTATGTCGTATAACGGTGGTGTGTTTATTGCTATTGTTGTTGGTCTTGCTGTTGGTTATTTGTTGTTTAGGAGTGATGGTGAAGATTCTGTTGTTGTTGATAGTTCTTGCGCTTGTGCTTGA 432 0.4491 MMHMTFYWSKKVTLLFDSWKTDSWTSYALSLLACLIVSIFYQFLENRRIRLKLLASGKPFPAAIEAPLLRRTFAGSGAKLGVRVAGAVLFGLSSAIGYFLMLSVMSYNGGVFIAIVVGLAVGYLLFRSDGEDSVVVDSSCACA* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3819 143 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 143 IPR007274 GO:0005375|GO:0016021|GO:0035434
Mtr3g3819 143 Pfam Ctr copper transporter family 4 126 IPR007274 GO:0005375|GO:0016021|GO:0035434
Mtr3g3819 143 PANTHER COPPER TRANSPORTER 5.1-LIKE 1 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3819 Mtr-Chr3 52010811 52011546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3819 1 143 Inorganic Solute Cotransporters AT5G20650 53.333 8.07e-52 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3819 K14686 - gmx:100805457 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3819 3 52010811 52011546 Mtr3g3819 3 52010811 52011546 ECH
Mtr3g3819 3 52010811 52011546 Mtr1g0327 1 3729352 3730104 ECH
Mtr4g4599 4 60018191 60018804 Mtr3g3819 3 52010811 52011546 ECH
Mtr8g0637 8 7500713 7502601 Mtr3g3819 3 52010811 52011546 ECH