Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3813 ATGACTCTCCGCAAGGGTTCCAAGGTTTGGGTTCCTGACAGGGATTCCGCTTGGCTTCCTGCTGAAGTCCTCGAATCTTCCAATAAACAACTTCGCGTTCAAACCGATTTCAGCAACAAGATTGTTGTTGTTGCTCCGGAGAAACTGTTTCCGAGAGATGCGGATGAAGATGAACACGGTGGAGTTGAAGATATGACGAGATTGATTTATTTGAATGAACCAGGGGTTTTGTATAATATTCGGAGAAGATATTTGAATAATGATATTTATACATACACGGGGAGCATTTTAATAGCTGTCAATCCATTCACAAAGCTTCCTCATTTGTACAATAACCATATGATGGAGCAGTATAAGGGAGCTCCATTTGGTGAGCTCAGTCCACATGTATTTGCCGTTGCTGATGCATCATATAGAGCAATGGTGAATGAAGGTCAAAGCCAATCTATCTTGGTCAGTGGTGAAAGTGGTGCTGGGAAAACTGAGACAACAAAATTGATTATGCAGTATCTTACCTTTGTTGGTGGGCGTGCTGTTTGTGATGATAGAACAGTTGAACAACAAGTTCTTGAATCGAATCCGCTTTTAGAGGCATTTGGCAATGCAAGGACCGTCAGGAATGACAATTCAAGCCGTTTTGGGAAGTTTGCTGAAATTCAGTTTGATTCAAGTGGTAAAATATCTGGTGCTGCAATTAGAACTTACTTATTGGAAAGATCACGAGTAGTGCAGACTACGGATCCAGAAAGAAATTATCACTGCTTTTATCAGTTGTGTGCATCTGAAAGGGATGTAGAGAAGTACAAGTTAGGACATCCAAGCCACTTCCACTATTTAAATCAAAGTAAAGTTTATGAACTAGATGGGGTAAGCAGCGCAGAAGAATACATAAAGACGAGAAGATCAATGGATATTGTTGGCATCAGTCACGAGGATCAGGACGCCATATTTCGCACCTTAGCCGCAATCTTACATCTGGGAAATGTTGAATTTTTTCCTGGGAAAGAACACGACTCGTCAATAATAAAGGATGAGAAATCAATATTTCACTTGCAGATGGCTGCTAACCTTTTCAAGTGTGATCTGAACCTACTGCGAGCAACATTATGCACTCGTTCAATACAAACCCGTGAAGGAAATATTGTCAAAGCTCTGGATTGTAATGCCGCTGTTGCTGGCAGGGATGTTTTGGCGAAAACCGTCTATGCTCGTTTGTTTGATTGGCTTGTTGATAAGATTAATAAAGCGGTTGGGCAAGATATCAATTCCAGGATGCAAATTGGAATATTGGATATATATGGTTTTGAGTCTTTTAAGGATAACAGTTTTGAGCAATTCTGCATCAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTGTTCAAGATGGAGCAAGAAGAGTATAAAAAAGAAGAAATTGAGTGGAGTTACATTGAATTTATAGACAACCAAGATGTTTTAGATTTGATTGAAAAGAAGCCCATTGGTATCATTGCCCTGTTAGATGAAGCTTGCATGTTTCCAAAATCAACGCACGAAACATTCTCAACCAAGTTGTTTCAGCACTTCTTGTCCCACGCTAGGTTTGGAAAGGAGAAGTTTTCAGAAACAGATTTTACTGTTTCTCATTATGCTGGAAAGGTCACATACCATACAGACACTTTTTTAGACAAAAATCGTGATTATGTAGTTCTAGAGCATTGCAATGTATTATCTTCCTCAAAATGCCCCTTCGTGTCGAGTCTCTTTCCTTCTTTACCAGAAGAATCCTCAAGGTCATCCTACAAGTTTTCTTCTGTGGCTTCCAGATTTAAGCAACAACTTCAAGCACTTATGGAAACACTTAAGACAACAGAGCCTCATTATATTCGATGTGTCAAGCCAAATTCTTCGAACCTACCACAAAAGTTTGAAAATACAAGTGTCTTGCATCAATTACGCTGTGGGGGTGTACTTGAGGCTGTTCGGATAAGTCTGGCAGGTTACCCAACTCGAAGGACTTACTCGGAGTTTGTAGATCGATTTGGATTAATAGCTCCTGAATTTATGGATGGAAGTTATGATGATAGAGCTACAACTCAGAAAATATTGCAAAAGCTAAAGCTTGAGAATTTTCAGCTGGGTAGGACTAAAGTGTTTCTCAGGGCTGGTCAAATTGGTATTTTAGACTCTAGGCGGTCTGAAGTTTTGGACAATGCTGCGAAGTTTATTCAGCGTCGACTGCGTACATTTATTGCACACAGGGATTTCATCTCAATCCGAGCTGCTGCTGTTTCTCTTCAAGCATGCTGCAGGGGTTGCCTTGCACGGAAGATATATGCTTCTAAACGGGAGACTGCAGCAGCTATCTCTATTCAGAAGTATATTCGTATGTGTCAGATGAGGTGTGCTTACATGACACTGTATTCTTCTGCTATCATCATACAATCAAATGTTCGTGGTTTCACAATTCGCCAAAGGTTTTTGCATAGAAAAGAACACAAAGCTGCTACTATTATTCAGGCGTATTGGAGGATGTGCAAGGTTCGGTATGCTTTCAAACAACTTCAATTTTCAATTGTGGCAATACAATGCCTTTGGCGCTGTAAACAAGCAAAAAGACAGCTCCGCAGACTGAAACAAGAGGCTCGTGAAGCTGGTGCCTTGCGTTTAGCTAAGACTAATCTGGAGAAACAATTGGAAGAGCTCACATGGCGTTTGCATCTTGAAAAAAAAAAAAGGGTTTCTAATGAAGAGGCTAAGCAAATTGAGATTTCCAAACTTCAAAAGATGCTGGAAGCTCTGAATTGTGAATTGGATGGAGCTAAATTGGCAACTATTAATGAGTCGAATAAGAATGCAATTTTACAAAATCAATTACAATTATCAGCACAGGAAAAATCTGCTTTAGAAAGAGAACTAGTTGCAATGAATGAAGTGCAAAAGGAAAATGCTCTGCTGAAGGGCTCTTTGGATGCCATGGAAAAGAAGAGCACAGCTTTGGAGCTTGAGCTTTTGAATGCTAAAAAAGACCATAATGAAACCATTCAGAAAATGAGGGAATTTGAACAGAAGAGTGCTCAACTAGCACAAAATATGAAAAGTCTTGAAGAAAAGCTATCGAGTTTGGAGAATGAAAATCAGGTGCTTCGTCAGAAAGCCTTAAGTGTATCTCCTAAGAGTAATCATCCAGGTTTTGCAAAGTCATCATCCGAACAGATAAAGTCAAGGGCAATAGCCCCACACATTGAGCAAAACCCAGTATTTGAATCACCTACACCCACAAAACTTATGTCCTCTTTGACACGTGGCTTGTCAGATTCTCGTCGATCTAAATTAACAGCAGAAAAGCATCAGGATAACTATGAATTCCTCACTAGGTGTATCAAAGAGGATTTGGGGTTCAAAAATGGTAAACCTGTGGCAGCTAGTATCATATACAAATGTCTTCTTCATTGGCATGCATTTGAATCTGAGCGCACAGCCATATTTGATTACATAATTGATGGAATCAATGAAGTCATAAAAGTCAGAGACGATGACATTGTCTTGCCATATTGGCTGTCCAATACCTCCGCACTTGTTTGCCTTTTACAGAGAAATGTTCGTTCAAATGGTTTTTTAACTACCACAGCTCAACGTTATGCTGGATCATCTGGCTTGACCAGCCGGATTGGGCATGGACTGAAGTCTCCATTAAAGTTAATTGGATATAATGATGGTATGTCGCACGTGGAGGCAAGATATCCAGCTATACTTTTTAAACAACAACTAACTGCTTGTGTAGAGAAGATTTTTGGCCATTTACGTGATAATTTGAAAAAGGAACTTTCTCCACTTTTGGCATTATGTATTCAGGCACCCAAAACAGGACGAGTGCAAAGTGGGAAATCATCTAGATCTCCTGGGGGGCTTCCTCAACAATCACCTGGTGGCCAATGGGACAGCATCATCAATTTTTTGAATTCACTCTTGAACCGATTATGTGCAAATCATATACCATCCTTCTTCATCCGCAAGCTAGTTACACAGGTGTTTTCCTTCATCAATATGACGCTATTCAACAGTCTTCTTTTGCGGCGTGAATGTTGTACTTTCTCAAATGGTGAATATGTAAAGTCTGGTCTTGCAGAACTAGAGAAATGGATAGTTAATGCAAATGAAGAGTATGCAGGAACATCCTGGCATGAGCTGAATTATATAAGACAAGCTGTTGGGTTTCTGGTAATACATCAGAAGAGGAAAAAATCTTTGGAAGAAATTATGCAGGATCTTTGTCCGGCATTAACTGTGAGGCAAATCTATCGAATTAGTACCATGTACTGGGATGACAAGTATGGAACCCAGAGTGTATCCAACGAGGTAGTTGGTGAAATGAGGGAAATTGTGAGCAAAGACAATCAGAGTTTGACCTCAAATTCATTCTTGATGGACGATGACATGAGTATTCCTTTCTCGGCTGAAGACATAGATATGGCGATCCCTGCTGTGAATACTGATGATATTGAGCTCCCAGCTTTCTTGAATGAATATCCTTGTGCCCAGTTTCTTGTTTCACACGAGTAA 4554 0.399 MTLRKGSKVWVPDRDSAWLPAEVLESSNKQLRVQTDFSNKIVVVAPEKLFPRDADEDEHGGVEDMTRLIYLNEPGVLYNIRRRYLNNDIYTYTGSILIAVNPFTKLPHLYNNHMMEQYKGAPFGELSPHVFAVADASYRAMVNEGQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAVCDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFAEIQFDSSGKISGAAIRTYLLERSRVVQTTDPERNYHCFYQLCASERDVEKYKLGHPSHFHYLNQSKVYELDGVSSAEEYIKTRRSMDIVGISHEDQDAIFRTLAAILHLGNVEFFPGKEHDSSIIKDEKSIFHLQMAANLFKCDLNLLRATLCTRSIQTREGNIVKALDCNAAVAGRDVLAKTVYARLFDWLVDKINKAVGQDINSRMQIGILDIYGFESFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYKKEEIEWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFQHFLSHARFGKEKFSETDFTVSHYAGKVTYHTDTFLDKNRDYVVLEHCNVLSSSKCPFVSSLFPSLPEESSRSSYKFSSVASRFKQQLQALMETLKTTEPHYIRCVKPNSSNLPQKFENTSVLHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIAPEFMDGSYDDRATTQKILQKLKLENFQLGRTKVFLRAGQIGILDSRRSEVLDNAAKFIQRRLRTFIAHRDFISIRAAAVSLQACCRGCLARKIYASKRETAAAISIQKYIRMCQMRCAYMTLYSSAIIIQSNVRGFTIRQRFLHRKEHKAATIIQAYWRMCKVRYAFKQLQFSIVAIQCLWRCKQAKRQLRRLKQEAREAGALRLAKTNLEKQLEELTWRLHLEKKKRVSNEEAKQIEISKLQKMLEALNCELDGAKLATINESNKNAILQNQLQLSAQEKSALERELVAMNEVQKENALLKGSLDAMEKKSTALELELLNAKKDHNETIQKMREFEQKSAQLAQNMKSLEEKLSSLENENQVLRQKALSVSPKSNHPGFAKSSSEQIKSRAIAPHIEQNPVFESPTPTKLMSSLTRGLSDSRRSKLTAEKHQDNYEFLTRCIKEDLGFKNGKPVAASIIYKCLLHWHAFESERTAIFDYIIDGINEVIKVRDDDIVLPYWLSNTSALVCLLQRNVRSNGFLTTTAQRYAGSSGLTSRIGHGLKSPLKLIGYNDGMSHVEARYPAILFKQQLTACVEKIFGHLRDNLKKELSPLLALCIQAPKTGRVQSGKSSRSPGGLPQQSPGGQWDSIINFLNSLLNRLCANHIPSFFIRKLVTQVFSFINMTLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNANEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIMQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVGEMREIVSKDNQSLTSNSFLMDDDMSIPFSAEDIDMAIPAVNTDDIELPAFLNEYPCAQFLVSHE* 1518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3813 1517 Coils Coil 973 1049 - -
Mtr3g3813 1517 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 54 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mtr3g3813 1517 PANTHER PROTEIN OPAQUE1-LIKE 3 1514 - -
Mtr3g3813 1517 ProSiteProfiles IQ motif profile. 852 881 IPR000048 GO:0005515
Mtr3g3813 1517 Coils Coil 865 909 - -
Mtr3g3813 1517 Coils Coil 914 941 - -
Mtr3g3813 1517 PANTHER MYOSIN 3 1514 - -
Mtr3g3813 1517 Gene3D - 436 621 - -
Mtr3g3813 1517 Gene3D - 831 880 - -
Mtr3g3813 1517 Gene3D - 732 781 - -
Mtr3g3813 1517 Gene3D - 782 830 - -
Mtr3g3813 1517 ProSiteProfiles IQ motif profile. 829 858 IPR000048 GO:0005515
Mtr3g3813 1517 Gene3D - 664 731 - -
Mtr3g3813 1517 Gene3D Kinesin motor domain 63 660 IPR036961 -
Mtr3g3813 1517 Pfam Myosin head (motor domain) 62 718 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr3g3813 1517 CDD MyosinXI_CBD 1112 1484 IPR037975 GO:0007015
Mtr3g3813 1517 SMART DIL_2 1336 1443 IPR002710 -
Mtr3g3813 1517 Coils Coil 949 969 - -
Mtr3g3813 1517 ProSiteProfiles Dilute domain profile. 1161 1461 IPR002710 -
Mtr3g3813 1517 Pfam IQ calmodulin-binding motif 782 801 IPR000048 GO:0005515
Mtr3g3813 1517 Pfam IQ calmodulin-binding motif 806 824 IPR000048 GO:0005515
Mtr3g3813 1517 Pfam IQ calmodulin-binding motif 757 776 IPR000048 GO:0005515
Mtr3g3813 1517 Pfam IQ calmodulin-binding motif 830 850 IPR000048 GO:0005515
Mtr3g3813 1517 Gene3D Single helix bin 1015 1050 - -
Mtr3g3813 1517 SMART MYSc_2a 54 731 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr3g3813 1517 Gene3D - 250 307 - -
Mtr3g3813 1517 SMART iq_5 780 802 IPR000048 GO:0005515
Mtr3g3813 1517 SMART iq_5 828 850 IPR000048 GO:0005515
Mtr3g3813 1517 SMART iq_5 851 873 IPR000048 GO:0005515
Mtr3g3813 1517 SMART iq_5 732 754 IPR000048 GO:0005515
Mtr3g3813 1517 SMART iq_5 803 825 IPR000048 GO:0005515
Mtr3g3813 1517 SMART iq_5 755 777 IPR000048 GO:0005515
Mtr3g3813 1517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 782 880 IPR027417 -
Mtr3g3813 1517 ProSiteProfiles IQ motif profile. 804 833 IPR000048 GO:0005515
Mtr3g3813 1517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 779 IPR027417 -
Mtr3g3813 1517 ProSiteProfiles IQ motif profile. 756 785 IPR000048 GO:0005515
Mtr3g3813 1517 PRINTS Myosin heavy chain signature 90 109 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr3g3813 1517 PRINTS Myosin heavy chain signature 147 172 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr3g3813 1517 PRINTS Myosin heavy chain signature 194 221 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr3g3813 1517 PRINTS Myosin heavy chain signature 426 454 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr3g3813 1517 PRINTS Myosin heavy chain signature 479 507 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr3g3813 1517 Pfam DIL domain 1337 1440 IPR002710 -
Mtr3g3813 1517 Gene3D Myosin VI head, motor domain, U50 subdomain 309 599 - -
Mtr3g3813 1517 CDD MYSc_Myo11 74 718 IPR036018 -
Mtr3g3813 1517 ProSiteProfiles Myosin motor domain profile. 60 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3813 Mtr-Chr3 51945082 51966324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3813 1 1514 Myosins gene family AT4G33200 71.683 0.0 2231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3813 K10357 - gmx:100796413 2561.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3813 3 51945082 51966324 Mtr3g3813 3 51945082 51966324 ECH
Mtr1g0351 1 4013869 4036711 Mtr3g3813 3 51945082 51966324 PCT