Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3812 ATGGCGTCTAATCTGCTAACTCTTTCTCTCTCCTCTCCACCTAACTTCCGTTTCAATTACGCATTCAATCTCAACCATGACCGCCACTTCATTTCTCTGCTTCCCACTAAACGCCGTCGCAACCGCAACAACCACCGCCGTAAAATTCTCCGGCCACTTTTATCCGTATCAAACACCTTCAGCACCGAAATTCGTTCACCGGAATCAGAATCGGAATCATTTCTTCTTCAAGCTCAAACACAGACCAAAGACTCTCCAGTTCTGCTTGACGTCACCGGAATGATGTGCGGCGGGTGCGTCTCCCGAGTCAAAACCATTCTCTCCTCCGACGATCGAGTTGACTCTGTAGTTGTCAACATGTTGACTGAAACCGCTGCTGTTAAGCTTAAAAAGCTCGAAGAGGAATCTACCAGCGTTGCGGATGGACTTGCTCGGAGATTGACGGGATGCGGGTTTCCGACGAAGAGGAGAGAATCGGGTTTAGGAGTTTCGGAGAATGTGAGGAAGTGGAAGGAGTTGGTGAAGAAGAAAGAGGAACTTCTTGCTAAGAGTCGTAACCGTGTTGCTTTTGCTTGGACTTTGGTTGCACTGTGCTGTGGTTCGCATGCTTCACACATTTTTCATTCTTTAGGAATTCACATTGCTCATGGACCGTTTTGGGAATTTCTTCATAATTCATATGTGAAAGGTGGTTTAGCTTTGGGTGCTCTATTGGGACCAGGAAAAGATTTACTCTTTGATGGCCTACTTGCTTTTAAGAAAGGATCGCCAAATATGAACTCTCTCGTGGGATTTGGTTCAATAGCTGCTTTCATCATCAGCTCGATCTCACTACTTAACCCAGAGCTGGCATGGGATGCGTCATTCTTTGATGAACCGGTCATGCTTCTTGGTTTCGTGCTTCTAGGACGTTCTCTAGAAGAAAAGGCAAGGATTCAGGCATCTAGTGATATGAATGAACTTCTTTCGCTAATATCTACTCAGTCAAGACTTGTCATTACATCATCAGAAGGTTCCCCATCTACTGACAGTGTGCTTAGCTCAGACGCAATTTGTGTGGAAGTTCCAACTGATGATATTCGAGTAGGAGATTCGGTGTTGGTGTTGCCTGGAGAAACTATCCCTATAGATGGAAGGGTCATTGCAGGAAGAAGCGTTGTGGACGAATCCATGCTTACAGGAGAATCACTTCCTGTTTTTAAGGAGGAAGGCCTTACAGTTTCAGCAGGAACTATAAACTGGGATGGTCCCTTAAGGATTGAATCTTCTTCGACTGGCTCCAACACAATGATATCCAAGATTGTACGCATGGTCGAGGATGCTCAATCGCGTGAAGCACCTGTACAAAGGCTTGCAGATTCAATAGCAGGGCCATTTGTATTTAGCATAATGGCTCTGTCAGCAGCAACATTTGCATTTTGGTATTTTGCTGGAACACACATATTTCCTGATGTTTTGCTCAATGATATTGCGGGCCCGGAAGGAGATCCTCTGCTTTTGAGTTTAAAACTCTCTGTAGATGTTTTGGTTGTTTCTTGTCCTTGTGCATTGGGTCTTGCCACACCAACAGCAATCCTAGTTGGCACCTCACTTGGGGCAAAAAAGGGACTTCTTATCAGAGGAGGGGATGTACTAGAACGCTTGGCTGGTGTAAATTATATTGCTCTAGACAAGACAGGAACCCTTACCAGGGGAAAACCAGTTGTTTCTGCCATTGGCTCTATTCATTATGGAGAGTCAGAAATTCTTCACATTGCTGCGGCAGTGGAGAAAACTGCATCTCATCCAATAGCAAAGGCTATTATTAATAAAGCTGAGTCATTAGAGTTGGTCCTTCCACCCACAAAAGGACAGATAGTTGAACCAGGTTTTGGAACCTTGGCAGAGATAGATGGGCGTTTGGTTGCGGTGGGGTCTTTAGAATGGGTCCATGAGCGTTTCAATACTAGAATGAACCCATCTGATTTGATGAATCTTGAACGTGCTTTGATGAATCATTCGTCGAGTACATCATCTTCGAAGTATTCGAAAACAGTTGTCTACGTTGGACGTGAAGGAGAAGGCATCATTGGTGCTATTGCCATATCTGACATCGTGCGTGAAGATGCTGAATCTACTGTAATGAGGCTCAAGAAGAAGGGAATTAAAACGGTCCTCTTATCAGGAGACAGGGAAGAGGCAGTTGCAACAATCGCAGAGACTGTTGGGATTGAAAATGATTTTGTCAAAGCATCCTTGTCTCCGCAGCAGAAATCTGCATTCATTTCATCTCTAAAAGCTGCTGGACATCATGTTGCGATGGTAGGTGATGGGATAAATGATGCACCCTCTTTGGCTGCAGCTGATGTTGGGATCGCTCTGCAGAATGAAGCTCAAGAGAATGCTGCCTCAGATGCAGCATCCATCATACTTCTGGGCAACAAAATTTCACAGGTTATTGACGCATTGGACCTAGCACAGGCAACGATGGCAAAAGTTTACCAAAATTTGTCCTGGGCAGTAGCATACAATGTTATTGCCATTCCCATTGCTGCTGGAGTGTTACTTCCCCAATTTGACTTTGCTATGACACCTTCACTTTCAGGAGGACTAATGGCTATGAGCTCCATCTTGGTGGTTAGCAACTCACTGCTTTTAAAGCTTCATGGGTCTCCGACCTCGGGAAAGGGCTCACTCTAG 2679 0.4505 MASNLLTLSLSSPPNFRFNYAFNLNHDRHFISLLPTKRRRNRNNHRRKILRPLLSVSNTFSTEIRSPESESESFLLQAQTQTKDSPVLLDVTGMMCGGCVSRVKTILSSDDRVDSVVVNMLTETAAVKLKKLEEESTSVADGLARRLTGCGFPTKRRESGLGVSENVRKWKELVKKKEELLAKSRNRVAFAWTLVALCCGSHASHIFHSLGIHIAHGPFWEFLHNSYVKGGLALGALLGPGKDLLFDGLLAFKKGSPNMNSLVGFGSIAAFIISSISLLNPELAWDASFFDEPVMLLGFVLLGRSLEEKARIQASSDMNELLSLISTQSRLVITSSEGSPSTDSVLSSDAICVEVPTDDIRVGDSVLVLPGETIPIDGRVIAGRSVVDESMLTGESLPVFKEEGLTVSAGTINWDGPLRIESSSTGSNTMISKIVRMVEDAQSREAPVQRLADSIAGPFVFSIMALSAATFAFWYFAGTHIFPDVLLNDIAGPEGDPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKKGLLIRGGDVLERLAGVNYIALDKTGTLTRGKPVVSAIGSIHYGESEILHIAAAVEKTASHPIAKAIINKAESLELVLPPTKGQIVEPGFGTLAEIDGRLVAVGSLEWVHERFNTRMNPSDLMNLERALMNHSSSTSSSKYSKTVVYVGREGEGIIGAIAISDIVREDAESTVMRLKKKGIKTVLLSGDREEAVATIAETVGIENDFVKASLSPQQKSAFISSLKAAGHHVAMVGDGINDAPSLAAADVGIALQNEAQENAASDAASIILLGNKISQVIDALDLAQATMAKVYQNLSWAVAYNVIAIPIAAGVLLPQFDFAMTPSLSGGLMAMSSILVVSNSLLLKLHGSPTSGKGSL* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3812 892 Gene3D - 78 159 - -
Mtr3g3812 892 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 259 879 IPR027256 GO:0006812|GO:0016021|GO:0019829
Mtr3g3812 892 SFLD p-type atpase 538 821 IPR044492 -
Mtr3g3812 892 Gene3D - 566 699 IPR023299 GO:0000166
Mtr3g3812 892 SUPERFAMILY Calcium ATPase, transmembrane domain M 291 549 IPR023298 -
Mtr3g3812 892 Coils Coil 167 187 - -
Mtr3g3812 892 PANTHER ATP7, ISOFORM B 78 881 - -
Mtr3g3812 892 Gene3D - 311 442 - -
Mtr3g3812 892 SUPERFAMILY Calcium ATPase, transduction domain A 349 438 IPR008250 -
Mtr3g3812 892 Pfam Heavy-metal-associated domain 89 152 IPR006121 GO:0046872
Mtr3g3812 892 ProSitePatterns E1-E2 ATPases phosphorylation site. 557 563 IPR018303 -
Mtr3g3812 892 Gene3D - 546 819 IPR023214 -
Mtr3g3812 892 PRINTS P-type cation-transporting ATPase superfamily signature 388 402 - -
Mtr3g3812 892 PRINTS P-type cation-transporting ATPase superfamily signature 555 569 - -
Mtr3g3812 892 PRINTS P-type cation-transporting ATPase superfamily signature 691 702 - -
Mtr3g3812 892 PRINTS P-type cation-transporting ATPase superfamily signature 713 723 - -
Mtr3g3812 892 PRINTS P-type cation-transporting ATPase superfamily signature 768 787 - -
Mtr3g3812 892 SUPERFAMILY HMA, heavy metal-associated domain 87 130 IPR036163 GO:0046872
Mtr3g3812 892 ProSiteProfiles Heavy-metal-associated domain profile. 86 156 IPR006121 GO:0046872
Mtr3g3812 892 SUPERFAMILY HAD-like 553 876 IPR036412 -
Mtr3g3812 892 Pfam E1-E2 ATPase 345 535 - -
Mtr3g3812 892 Pfam haloacid dehalogenase-like hydrolase 551 782 - -
Mtr3g3812 892 CDD HMA 89 153 IPR006121 GO:0046872
Mtr3g3812 892 SFLD Haloacid Dehalogenase 538 821 - -
Mtr3g3812 892 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 350 860 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3812 Mtr-Chr3 51931816 51941815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3812 251 885 Primary Pumps ATPases AT1G63440 37.288 1.01e-118 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3812 K17686 - gmx:100127402 1395.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3812 3 51931816 51941815 Mtr3g3812 3 51931816 51941815 ECH