Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3805 ATGGATGGTAATAATAATAATAATAAGCATCAAGGTGGTGAAGTGAGCATGATGGAGAAGAAAACAGAAGTGGTGGTGGCGATTTCAAATGTGGGTGGAGATACCCATCACCATGGCCAAGATCATGATCATGAGTTGAAAGGAGTTGAATCTTCACCTCGCTATTCTACAAAGTCACCACCTTTAAACTGTGCTTCCCCTGAAATAAGGTTCATCCCTAGCCCAAATAAGCCCCCAAAGGTTCCTGCTACAAATGAAAGCCTTACCCCAAGAAAAACTCTTGTTAGATCAGTGTTCTCTAAGCCCAAATCAAGATTTGGTGAACAACCTTACCCTATTGATGGAACCCTTTTAGAAGAGAATGTTACTTCTTCAAATTTGCAAGATCAGATAGCTGTTACTTCACCATATAAAGCATCACGTTCACCGAATAACAAACATGGAACAGTTTATAGAACCGTTTCGATTACTTCTGTCGTCACTCCTAGAACACCTTTGATGACATCTCCAGGTCCTGCTGGCGAGGATCCTGATGAAATCATTTACAAGAAAGTTGAATTTAGTAAAGGCAAGCGTAAGAGACTAACTACTAAGGTTTTGATCGAGTTGTTCGTGTTTGTGTGCATCACGGGTAGCTTGTTGGCTAGTTTAACAGTTGAGGAACTAAAAAGGACGGAGATTTGGAGTTTGGGGCTTTGGAGGTGGTGTATGCTTGTGATGGTGACATTTTGTGGCATGTTAGTTACCAAATGGTTCACGCACATTGTGGTTTTCTTGATTGAAATGAACTTTTTATTGAAGAAAAAGGTGCTTTATTTTGTTCATGGACTGAAGAAATGTATCCAGGTTTTCACTTGGATTGCTTTGGTTCTCCTCACTTGGGTGCTTTTAATCAATCGTGGAGTCCAGCGATCTAAATTGGCCACGAAGATTTTGGATGGTGTAACATGGACTCTTGTTTCCCTTCTCATTGGAACATTTTTGTGGGTCATAAAGACATTGTTGCTAAAGATTTTGGCATCGAGTTTCCATGTCAAATCTTTCTTTGATCGAATTCAAGAATCGATCTTCCATCAATATGTTCTGCAGACTCTCTCTGGGCCTCCACTAATGGAAGAGGCTGAGAAAGTCGGCGGATCTCAAAGCACTTCCCATTTTAGTTTCAGGAGTACAACCAGTAAAGGTAGCACAAAGAAAGAGGTTATTGATATGGCAAAGCTTCACAAGATGAAGCAAGAGAAAGTTTCTTCATGGACTATGAAGATTTTGGTAGATGCAGTGATGAACTCAAGGCTGTCCACAATCTCTAACTCTCTAGATGAAAGTTTTTATGATGTAGAAAACGAACAGAATGATAAAGAAATTACTAATGAGATGGAAGCAACTGCTGCTGCCTATTACGTTTTCAGGAATGTTGCTGCTTCCCCTAGCTGCAAGGACATCGACGAGGATGAACTCCGTAGGTTCTTGATTAAGGAAGAAGTTCCTTTGGTATTTCCCCTACTAGCACAGGCAGAAACAGGGCTGATTACTAGAAAATCTTTAGCAGCTTGGGTGTTGAAGGTATATCAAGAACGTAGAGCACTCGCACATGCCTTAAGTGACACTAAAACAGCGGTTAAACAATTAAACAAGCTTGTTACAGGGGTCCTAGTAGTGGTGACCATAGTAGTGTGGCTTCTTCTAATGGAGATTGCAACAACAAAAGTACTTGTATTCCTCTCATCACAGCTAGTACTTGCGGCTTTCATGTTTGGAAACACGTGCAAGAATATATTTGAAGCCATCATCTTCGTGTTTGTAATGCATCCATTTGATGTTGGCGATCGATGTTTTATAGATGGTGTTGAGCTATTGGTTGAAGAAATGAACATACTGACAACAGTATTCTTGAAACTTAATAATGAAAAGGTGTATTATCCAAACTCTGTCCTAGCCATAAAACCGATCAGCAATTATTACAGAAGCCCTAATATGGGTGACAGTGTAGAGTTCTCAGTTGATTTTACAACGTCAGCAGAGAAAATCGGATCACTGAATGAAAAAATAAAGAGGTATTTGGAGAGGAATCCACAATACTGGCATCCTAGTTTCAGTTTGGCAGTGAAGGAGATTGAAAATGTAAATAAGATTAAGATGGGTCTTTATGTTACTCACACAATGAACTTTCAAGAATTTGGGGAGAAGACTAAGCGGAGAAGTGAATTAGTGATGGAAGTAAAGAAAATATTTGAAGAGCTCAATATCAGATACTACCTTATTCCGCAAGGTGTTCATCTCAGACACATGGAACCTGATTCAAGTTATCTCAAGTGA 2316 0.3968 MDGNNNNNKHQGGEVSMMEKKTEVVVAISNVGGDTHHHGQDHDHELKGVESSPRYSTKSPPLNCASPEIRFIPSPNKPPKVPATNESLTPRKTLVRSVFSKPKSRFGEQPYPIDGTLLEENVTSSNLQDQIAVTSPYKASRSPNNKHGTVYRTVSITSVVTPRTPLMTSPGPAGEDPDEIIYKKVEFSKGKRKRLTTKVLIELFVFVCITGSLLASLTVEELKRTEIWSLGLWRWCMLVMVTFCGMLVTKWFTHIVVFLIEMNFLLKKKVLYFVHGLKKCIQVFTWIALVLLTWVLLINRGVQRSKLATKILDGVTWTLVSLLIGTFLWVIKTLLLKILASSFHVKSFFDRIQESIFHQYVLQTLSGPPLMEEAEKVGGSQSTSHFSFRSTTSKGSTKKEVIDMAKLHKMKQEKVSSWTMKILVDAVMNSRLSTISNSLDESFYDVENEQNDKEITNEMEATAAAYYVFRNVAASPSCKDIDEDELRRFLIKEEVPLVFPLLAQAETGLITRKSLAAWVLKVYQERRALAHALSDTKTAVKQLNKLVTGVLVVVTIVVWLLLMEIATTKVLVFLSSQLVLAAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCFIDGVELLVEEMNILTTVFLKLNNEKVYYPNSVLAIKPISNYYRSPNMGDSVEFSVDFTTSAEKIGSLNEKIKRYLERNPQYWHPSFSLAVKEIENVNKIKMGLYVTHTMNFQEFGEKTKRRSELVMEVKKIFEELNIRYYLIPQGVHLRHMEPDSSYLK* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3805 771 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 20 761 - -
Mtr3g3805 771 PIRSF Memb_At2g17000 1 770 IPR016688 -
Mtr3g3805 771 Pfam Mechanosensitive ion channel 545 750 IPR006685 GO:0016020|GO:0055085
Mtr3g3805 771 Gene3D - 604 653 IPR023408 -
Mtr3g3805 771 MobiDBLite consensus disorder prediction 32 86 - -
Mtr3g3805 771 MobiDBLite consensus disorder prediction 35 51 - -
Mtr3g3805 771 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 20 761 IPR016688 -
Mtr3g3805 771 SUPERFAMILY Sm-like ribonucleoproteins 594 653 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3805 Mtr-Chr3 51849149 51852909 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3805 51 760 Mechanosensitive Ion Channel Family AT5G12080 57.983 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3805 K22048 - gmx:100777617 1142.49