Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3801 ATGGATAGTAATAAGCATCATGGTGGTGGTGAAGTAAGCATGATGGAGAATAGAAGAGAAGTGGTAGTTCCTATTTCAAATGTGAGTCGAGACCATGGCCAAGATCATGATCATGATCATGAGTTGAAAGTTTTTGAATCTTCACCTCGCTACTCTACAAAGTCACCACCTTTAAACTGTGCTTCCCCTGAAATAAGGTTCATCCCTAGCCCAAATAAACCCCCAAAATCTCCTGCTGCAACTGCAAAACTTACCACAAGAAAATCTTTTAAAAGATCAGTGTATTCTAAGCCCAAATCAAGATTTGGTGAACAACCTTATCCTATTGATGAAACCCTTTTAGAAGAGAATGTTACTTATTCAAATTTGCAAGAACATTTAGCTGTTAGTTCACCTTATAGGAACACATTTAATAAAGCATCACATTCACCGAATAACAAGTCTGGAACGGTGAATCGGTCTGTTTCTATAACTTCTGTAGTCACTCCTAGAACACCTTTGATGGCATCTCCAGGTCCTGCTGGCGAGGATCTTGATGAAATCATTTTCAGGAAAGTTGAATCCAGTAGAGGCAAGCGAAAGAGACTAACAACAAAGGTCTTGATTGAATTGTTCGTTTTTGTATGCATCGCGGGTAGCTTGTTGGCTAGTTTAACGGTTGAGAAACTGAGAAGGACAGAGCTTTGGAGTTTAAGGCTTTGGAGGTATTGTATGCTTGTGATGGTGACATTTTGTGGCATGTTAGTTACCAAATGGTTCATGCACATTCTTGTTTTCTTGATTGAAATGAACTTTTTGTTGAAGAAAAAAGTACTTTATTTTGTTCATGGATTGAAGAAATGTGTCCAGGTTTTCATTTGGATCAGTTTGGTTCTCCTCACATGGGTGCTTTTAATCAATCGTGGGGCCCATCGATCTAAATTGGCCGCAAAGATTTTGAATGATATAACATGGACTCTTGTTTCCCTTCTCATTGGAGCATTTTTGTGGGTTATAAAGACATTGTTGCTAAAGGTTTTGGCATCGAGTTTCCATGTTAAATCTTTCTTTGATCGAATTCAAGAATCAATCTTCCATCAATATGTTCTGCAGACTCTCTCTGGGCCTCCACTTATGGAAGAGGCTGAGAAGATCGGCGGAACTCAAAGTATTGGCCATTTTAGTTTCAGGAGTACTACCGTTAATGGCGGCACAAAGAAAGACATCATTGATATGGCAAAGCTTCACAAGATGAAGCAAGGGAAAGTTTCCTCGTGGACTATGAAGATTTTGGTAGATGCAGTGATGAATTCAAGGCTGTCCACAATCTCTAATTCACTGGATGAAAGTTTTTATGATGTAGAAAATGAACCGAATGATAAAGAAATTACTAATGAGATGGAAGCAACTGCTGCTGCCTATTACGTTTTCAGGAATGTTGCTGCTTCCCCTAGCTGCCAGGACATTGATGAGAATGAACTCCGTCGTTTCCTGATTAAGGAAGAAGTTCCTTTGGTATTTCCCCTACTGGCACAGTCAGAGACAGGGCTCATTACCAGAAAGTCTTTAGCAGATTGGGTGTTGAAGGTTTATCAAGAGCGTAAAGCACTGGCACACGCTTTAAGCGACACTAAAACAGCTGTAAAACAATTAAACAAGCTTGTTACAGGGGTCCTAGTAGTGGTGACCATAATAGTGTGGCTTCTTCTAATGGAGATTGCGACAACAAAAGTACTTGTATTCCTCTCATCGCAGCTAGTACTCGCGGCTTTCATGTTTGGAAACACGTGCAAGAATATTTTTGAAGCCATCATCTTCGTGTTTGTAATGCATCCGTTCGATGTTGGCGATCGGTGTGTTATAGATGGTGTTGAGCTATTGGTTGAAGAGATGAATATATTGACAACAGTATTCTTGAAGCTTAATAATGAAAAGTTGTATTATCCAAACTCTGTCCTCGCCTCTAAACCGATTAGCAATTATTACAGAAGCCCAAATATGGTTGAAAAGGTAGAGTTCTCGGTTGATTTTACGACACCAGCAGAGAAAATTGGGGCACTGAAAGAAAAAGTGAAGAGGTATTTGGAGAAGAATCCACAATACTGGCATCCTAATTTTGGATTGGTAGTGAAGGAGATTGAAAATGTAAATAATATTAAGATGGGTCTTTTTGTTACTCACACAATGAATTTTCAAGAGTTTGGAGAGAAGACCAAGCGGAGAAGTGAACTAGTAATGGAAGTAAAGAAAATATTTGAAGATCTCAATATAAGATACAACCTTCTTCCACAAGGTGTTCATCTCAGACACATGGAACCTGATGCAAGTTATCTCAAATGA 2319 0.3915 MDSNKHHGGGEVSMMENRREVVVPISNVSRDHGQDHDHDHELKVFESSPRYSTKSPPLNCASPEIRFIPSPNKPPKSPAATAKLTTRKSFKRSVYSKPKSRFGEQPYPIDETLLEENVTYSNLQEHLAVSSPYRNTFNKASHSPNNKSGTVNRSVSITSVVTPRTPLMASPGPAGEDLDEIIFRKVESSRGKRKRLTTKVLIELFVFVCIAGSLLASLTVEKLRRTELWSLRLWRYCMLVMVTFCGMLVTKWFMHILVFLIEMNFLLKKKVLYFVHGLKKCVQVFIWISLVLLTWVLLINRGAHRSKLAAKILNDITWTLVSLLIGAFLWVIKTLLLKVLASSFHVKSFFDRIQESIFHQYVLQTLSGPPLMEEAEKIGGTQSIGHFSFRSTTVNGGTKKDIIDMAKLHKMKQGKVSSWTMKILVDAVMNSRLSTISNSLDESFYDVENEPNDKEITNEMEATAAAYYVFRNVAASPSCQDIDENELRRFLIKEEVPLVFPLLAQSETGLITRKSLADWVLKVYQERKALAHALSDTKTAVKQLNKLVTGVLVVVTIIVWLLLMEIATTKVLVFLSSQLVLAAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVIDGVELLVEEMNILTTVFLKLNNEKLYYPNSVLASKPISNYYRSPNMVEKVEFSVDFTTPAEKIGALKEKVKRYLEKNPQYWHPNFGLVVKEIENVNNIKMGLFVTHTMNFQEFGEKTKRRSELVMEVKKIFEDLNIRYNLLPQGVHLRHMEPDASYLK* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3801 772 MobiDBLite consensus disorder prediction 64 85 - -
Mtr3g3801 772 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 15 762 - -
Mtr3g3801 772 Gene3D - 605 654 IPR023408 -
Mtr3g3801 772 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 15 762 IPR016688 -
Mtr3g3801 772 Pfam Mechanosensitive ion channel 546 751 IPR006685 GO:0016020|GO:0055085
Mtr3g3801 772 PIRSF Memb_At2g17000 3 771 IPR016688 -
Mtr3g3801 772 SUPERFAMILY Sm-like ribonucleoproteins 595 654 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3801 Mtr-Chr3 51835684 51839220 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3801 47 761 Mechanosensitive Ion Channel Family AT5G12080 57.639 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3801 K22048 - gmx:100777617 1121.69