Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3800 ATGAAAGGAAATCAAAGTTTATTGATCCTATTATTTGAATTTCTCTTCTTTTTTCTTGGAGGAGAGTCAATATCATCCTCGGCTACTAAATCAGGAAATAACAATCAAGTTTATATTGTATACATGGGAGCCGCAAATTCAACAAATGCCCATGTTTTAAACACTGTGTTAAGAAGGAATGAAAAAGCTCTAGTACATAACTATAAGCACGGATTCTCAGGCTTCGCAGCTCGTTTATCGAAAAATGAAGCAGCCTCAATTGCTCAACAACCTGGAGTTGTGTCTGTGTTTCCAGATCCCATTCTGAAGCTTCACACAACTCATTCTTGGGATTTCCTCAAGTTGCAAACTCATGTCAAAATCGACAGCACTCTCTCCAATTCTTCTTCTCAATCTTCATCGTCGGACATCGTAATCGGCATGTTAGACTCAGGTATATGGCCAGAAGCAACAAGTTTTTCGGACAATGGAATGGATCCTATTCCATCCGGTTGGAAAGGCATTTGCATGACATCAAATGACTTCAACTCATCTAATTGTAATAGGAAGATAATAGGAGCAAGGTATTACCCTAACCTTGAAGGGGATGATCGTGTGGCGGCCACAACAAGGGATACAGTTGGGCATGGAACCCACACGGCTTCGACAGCGGCGGGGAATGCCGTGAGTGGTGCATCATACTATGGTCTCGCGGAAGGGATAGCAAAAGGTGGTTCCCCTGAATCGAGGTTGGCGATTTACAAAGTGTGCAGCAATATTGGTTGCTCTGGCTCTGCCATACTTGCGGCGTTTGACGATGCAATTTCTGATGGAGTTGATGTGCTTTCGCTCTCCCTTGGTAGGGGTCCGAGTTCCCAACCTGACTTGAAAACCGACGTGATTGCAATTGGAGCGTTCCATGCCATGGAGCACGGCATCGTGGTGGTTTGCTCCGCTGGGAATTCTGGTCCAGAGCTAAGTACTGTTGTTAATGATGCACCTTGGATATTAACGGTTGCTGCCACCACTATTGACCGTGACTTTCAGTCCAATGTTGTCTTGGGTAATAACAAAGTTGTCAAGGGTCAAGCCATAAATTTCTCCCCTCTTTCAAAATCTGCCGATTATCCATTGATAACTGGAAAGTCTGCTAAGACAACTACTGCTGACTTAACTGAAGCAAGTCAGTGTCATCCAAGTTCATTAGATAAGAAAAAAGTTGAAGGAAATATTGTCATCTGCGATGGGGTAGATGGTGATTATTCAACCGATGAAAAAATTAGGACGGTGCAAGAGGCGGGTGGATTAGGTCTTGTTCATATTACTGACCAGGATGGAGCTGTGGCAAATATTTATGCAGACTTCCCAGCAACAGTGGTAAGATCAAAAGATGTTGTCACACTCCTCAAATATGTCAATTCAACGAGCAATCCAGTAGCAACAATTCTACCAACAGTCACAGTCATAGATTATAAGCCTGCACCTATGGTGGCAATCTTTTCAAGTAGAGGACCTTCAGCTCTTTCAAAGAATATTCTCAAGCCTGATATTGCAGCACCAGGTGTTACCATTCTTGCAGCATGGATTGGAAATGACGATGAAAATGTTCCAAAGGGAAAAAAGCCCTTGCCGTATAAACTTGAAACCGGAACTTCCATGTCATGCCCACATGTTTCGGGCCTTGCAGGTAGCATCAAATCTAGGAACCCTACTTGGAGTGCCTCTGCAATCAGATCAGCCATCATGACATCTGCAACACAAATTAATAATATGAAGGCTCCCATTACTACAGATTTAGGGTCAGTTGCCACACCTTATGACTATGGAGCAGGGGACATAACAACAATTGAATCATTCCAACCAGGTCTCGTTTATGAAACTAGCACCATTGACTACTTGAATTACTTGTGTTACATAGGATACAACACAACCACTATTAAGGTTATTTCAAAAACTGTCCCTGATACTTTCAACTGCCCCAAGGAATCAACTCCTGATCATATTTCCAATATCAATTATCCTTCCATAGCAATTTCCAACTTCACTGGGAAAGAAACTGTGAATGTGAGTAGAACTGTTACAAACGTTGGCGAAGAGGATGAAGTAGCCTACTCTGCCATAGTTAATGCTCCTAGTGGTGTGAAAGTTCAGCTGATTCCAGAGAAACTACAATTCACAAAAAGCAATAAAAAACAAAGCTACCAAGCTATTTTCTCTACTACTTTAACCTCGTTGAAGGAAGATCTGTTTGGATCCATTACATGGAGTAACGGTAAATATAGTGTTCGAAGTCCTTTTGTACTAACTATGTAG 2292 0.4215 MKGNQSLLILLFEFLFFFLGGESISSSATKSGNNNQVYIVYMGAANSTNAHVLNTVLRRNEKALVHNYKHGFSGFAARLSKNEAASIAQQPGVVSVFPDPILKLHTTHSWDFLKLQTHVKIDSTLSNSSSQSSSSDIVIGMLDSGIWPEATSFSDNGMDPIPSGWKGICMTSNDFNSSNCNRKIIGARYYPNLEGDDRVAATTRDTVGHGTHTASTAAGNAVSGASYYGLAEGIAKGGSPESRLAIYKVCSNIGCSGSAILAAFDDAISDGVDVLSLSLGRGPSSQPDLKTDVIAIGAFHAMEHGIVVVCSAGNSGPELSTVVNDAPWILTVAATTIDRDFQSNVVLGNNKVVKGQAINFSPLSKSADYPLITGKSAKTTTADLTEASQCHPSSLDKKKVEGNIVICDGVDGDYSTDEKIRTVQEAGGLGLVHITDQDGAVANIYADFPATVVRSKDVVTLLKYVNSTSNPVATILPTVTVIDYKPAPMVAIFSSRGPSALSKNILKPDIAAPGVTILAAWIGNDDENVPKGKKPLPYKLETGTSMSCPHVSGLAGSIKSRNPTWSASAIRSAIMTSATQINNMKAPITTDLGSVATPYDYGAGDITTIESFQPGLVYETSTIDYLNYLCYIGYNTTTIKVISKTVPDTFNCPKESTPDHISNINYPSIAISNFTGKETVNVSRTVTNVGEEDEVAYSAIVNAPSGVKVQLIPEKLQFTKSNKKQSYQAIFSTTLTSLKEDLFGSITWSNGKYSVRSPFVLTM* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3800 763 SUPERFAMILY Subtilisin-like 104 609 IPR036852 GO:0004252|GO:0006508
Mtr3g3800 763 Pfam Subtilase family 134 604 IPR000209 GO:0006508|GO:0008236
Mtr3g3800 763 Gene3D - 629 763 - -
Mtr3g3800 763 Pfam Fibronectin type-III domain 663 760 IPR041469 -
Mtr3g3800 763 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Mtr3g3800 763 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.1 43 761 - -
Mtr3g3800 763 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 105 IPR037045 -
Mtr3g3800 763 CDD PA_subtilisin_like 344 475 - -
Mtr3g3800 763 Gene3D Peptidase S8/S53 domain 136 625 IPR036852 GO:0004252|GO:0006508
Mtr3g3800 763 ProSiteProfiles Serine proteases, subtilase domain profile. 109 613 - -
Mtr3g3800 763 CDD Peptidases_S8_3 102 579 IPR034197 -
Mtr3g3800 763 Gene3D - 338 482 - -
Mtr3g3800 763 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 43 761 IPR045051 -
Mtr3g3800 763 Pfam Peptidase inhibitor I9 37 105 IPR010259 -
Mtr3g3800 763 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Mtr3g3800 763 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Mtr3g3800 763 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3800 Mtr-Chr3 51823753 51828651 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3800 22 762 Subtilisin-like Serine Gene Family AT1G20150 51.316 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3800 K25898 - gmx:100820194 1100.12