Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3799 ATGGATGGTAATAAGCATCAAGGTGGTGAAGTAAACATGATGGAGAAGAAAAGAGAAGTGGTGGTGGCAATTTCAAATGTGGGTGAACTAGAGAGCCATGACCAAGATCATGATCATGGGTTGAAAGTGTTTGAATCTTATGAAAAAGAGCTTGCTTCAAAGTCAACACCTTTAAACTGTGCTTCTCCTGACATAAGGTTCACCCCAAGCCCAAATACACCCCCTCAAGTTCCTGCTACAAATGAAAACCTTACCACGAGAAAAACTCTCCGAAGATCTGTGTATTCTAAACCCAAATCAAGGTTTGTAGAACAATCTTACCCTATTGATGAGACCCTTTTAGAAGAGAATGTTACTTGTCCAAATTCGCAAGAACAATCAGCTGTTACTTCACCTTATAGGAACTCTTATTCACCTAGAACACCTTTAAGGGCATCTCCAGGTTCTTCTTCCGGTGAAGATCCTGACGAAGTCATTTATAGGAAAGTTGAATTTAGTAAATCCCAGCATAAGAGACTAGCGACTAAGGTTTTGATCGAATTGTTCATGTTTGTGTGCGTTGTGGGTGTCTTGTTGGCTAGCTTAACAATTGAGGAACTGAAAAGGATACATATTTGGAGTTTAGGGCTTTGGAGGTGGTGTATGCTTGTGATGGTGACATTTTTTGGCTTGTTAGTTACCAAATGGTTCATGCACATTGTTGTTTTCTTGATTGAAATGAACTTTTTGTTGAAGAAAAAGGTGCTTTATTTTGTCCATGGGTTGAAGCAATGTGTCCAGGTTTTCATTTGGATCAGTTTGGTTCTCCTTACATGGGTACTTTTTATCAATCACGAGGTCCAGCGATCTAAATTAGCCGCAAGGTTTTTGAATGATGTAACATGGACTCTTGTTTCCCTTCTCATTGGAGCATTTTTGTGGGTTATAAAGACATTGTTGCTAATGATTTTGGCATCAAATTTCCATGTCAAATCTTTCTTTGATCGAATTCAAGAATCGATCTTTCATCAATATGTTCTACAGATGCTGTCTGGGCCTCCACTAATGGAAGAGGCTGAGAAAATCGGCAGATCTCAAGGTGTTGGCCGTTTTAGTTTCGGGAGTACAACTGTTAAAGGTTGCACAAAGAAAGAGGTTATTGATATGGCACAGCTTCACAACATGAAGCAAGAGAAAGTCTCCGCGTGGACCATGAAGATTTTGGTAGACGCAGTGATGAATTCAAGGCTGTCCACAATCTCTAATTCACTTGATGAAAGTTTTTATGATGTAAAAAATGAACGGACTGGTAAAGAAATTACTAATGAGATGGAAGCAACTGCTGCTGCCTATTATGTTTTCAAGAATGTTGCTGCTTCCCCTTGTTGCAAGGACATTGATGAGAATGAACTTCGTAGATTCATGATTAAGGATGAAGTTCCTTTTGTATTTCCCCTACTGGCCCAGGCAGATACAGGGCTAATTACCAAAAAGTCTTTAGCAGATTGGGTGTTAAAGGTTTATCAAGAACGTAAAGCACTGGCGCATGCCTTATGCGACACAAAAACAGCTGTTAAACAATTAAACAAGCTTGTGACAGGGGTGTTGGTAGTGGTGAGCATAGTAGTGTGGCTTCTTCTAATGGAGATTGCAACAACAAAAGTACTTGTATTCCTCTCATCACAGCTAGTACTAGCGGGGTTCATGTTTGGAAACACGTGCAAGAATATATTTGAAGCCATCATCTTCGTCTTTGTAATGCATCCATTCGATGTTGGCGATCGTTGTGTTGTAGATGGTGTTGAGCTATTGGTTGAAGAAATGAATATATTGACAACAGTATTCTTGAAGCTTAATAATGAAAAGGTGTATTATCCAAACTCTGTCCTCGCCACTAAACCGATTAGCAATTATTACAGAAGCCCAAATATGGCTGAAGGTATAGAGTTCTCGGTTGATTTTACGACACCAGCAGAGAAAATTGGAGCATTGAAAGAAAAAATAACGAGGTACGCGGAGAGGAATCCACAATACTGGCATCCTAATTTCAGCTTGGTAGTAATAGAGATTGAAAATGTAAATAAGATTAAGATGGGTCTTTATGTTACTCACACAATGAACTTTCAAGAGTTTGGAGAGAAGGTGAATAGGAAAAGTGAACTAGTGATGGAAGTTAAAAGAATATTTGAAGAGCTCAATATCAGATACAGCCTTCTTCCACAAGGTGTTCATCTCAGACACATAGAACCTGACACAAGTTCTCTCAAATGA 2250 0.3916 MDGNKHQGGEVNMMEKKREVVVAISNVGELESHDQDHDHGLKVFESYEKELASKSTPLNCASPDIRFTPSPNTPPQVPATNENLTTRKTLRRSVYSKPKSRFVEQSYPIDETLLEENVTCPNSQEQSAVTSPYRNSYSPRTPLRASPGSSSGEDPDEVIYRKVEFSKSQHKRLATKVLIELFMFVCVVGVLLASLTIEELKRIHIWSLGLWRWCMLVMVTFFGLLVTKWFMHIVVFLIEMNFLLKKKVLYFVHGLKQCVQVFIWISLVLLTWVLFINHEVQRSKLAARFLNDVTWTLVSLLIGAFLWVIKTLLLMILASNFHVKSFFDRIQESIFHQYVLQMLSGPPLMEEAEKIGRSQGVGRFSFGSTTVKGCTKKEVIDMAQLHNMKQEKVSAWTMKILVDAVMNSRLSTISNSLDESFYDVKNERTGKEITNEMEATAAAYYVFKNVAASPCCKDIDENELRRFMIKDEVPFVFPLLAQADTGLITKKSLADWVLKVYQERKALAHALCDTKTAVKQLNKLVTGVLVVVSIVVWLLLMEIATTKVLVFLSSQLVLAGFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVVDGVELLVEEMNILTTVFLKLNNEKVYYPNSVLATKPISNYYRSPNMAEGIEFSVDFTTPAEKIGALKEKITRYAERNPQYWHPNFSLVVIEIENVNKIKMGLYVTHTMNFQEFGEKVNRKSELVMEVKRIFEELNIRYSLLPQGVHLRHIEPDTSSLK* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3799 749 PIRSF Memb_At2g17000 5 748 IPR016688 -
Mtr3g3799 749 Pfam Mechanosensitive ion channel 523 728 IPR006685 GO:0016020|GO:0055085
Mtr3g3799 749 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 15 738 - -
Mtr3g3799 749 MobiDBLite consensus disorder prediction 118 148 - -
Mtr3g3799 749 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 15 738 IPR016688 -
Mtr3g3799 749 MobiDBLite consensus disorder prediction 118 154 - -
Mtr3g3799 749 SUPERFAMILY Sm-like ribonucleoproteins 572 631 IPR010920 -
Mtr3g3799 749 MobiDBLite consensus disorder prediction 55 83 - -
Mtr3g3799 749 Gene3D - 582 631 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3799 Mtr-Chr3 51816026 51819773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3799 49 738 Mechanosensitive Ion Channel Family AT5G12080 56.681 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3799 K22048 - gmx:100803107 1044.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3799 3 51816026 51819773 Mtr3g3799 3 51816026 51819773 ECH