Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3798 ATGAACACAAGAAACAGTCCTCAGATTCAGAAGAGCCTGTCTCGGCAGTCATCGAAGAATTCTAAGGCAAAGCAAGAGCCACTTAGTCCGTTTTCTGGTGGATGCTGCCGAGGCTTCACCAGCGTGAAGACTGTGGCATCCACCACATCAACCTTGCAACAACATCAGCTACAACAACGTTATGAGAGTTTGGAAGTGAAGGTGGCAGATTTGGAAAAGGAGGTGCAAAAGCAGACAGAACTCCGAGTGATGTATAGGAAAAGAATGGAAAGGACACAAGACTATTTAAGGTACTGCCTCCAAATAGCACAAGAGAATGGAATCTTGGAACACATTATCCACTCCAAAGGTGAACTTCAACATTCTCCTCTATCTGTCTACAATGTCAGCTCCATTACCAATAGTCCTCGAATTCCCACTCATAGTCCTAAGCACCAGCACCACCCCAATCTAGAAGCCATCATTGATCAAGCCAAAATCAATGGATGGTATATCAACCCAACCGAGATTCAATTGGAAGATAAAATAGGGCAGGGAACCACAGCAGAAATTCATAGGGGAACATGGCGTGGATTTGATGTGGCAGTGAAGTGCATTTCACCTGAATTCTTTCGCACAAATGCAAACGGTGTTGAATTCTTTGCTCAAGAGGTTGAAACTCTCTCAAAGCAACGCCACAGGTTTGTGCTTAATCTAATGGGTGCATGTCTTGACCCTCCTAATCATGCTTGGGTGGTTACTGAATATCTAAGCACCACACTTAAGGAGTGGCTTTATGGTCCTGGCAAAAGACGCAGAGATAGAATTGTGCCACTTCCTCCTTTCAAAGAAAGACTAACAAGGGTCATAGAGATAGCCCAAGCTATGCAGTATCTTCATGAGCAAAAGCCCAAAATTATTCACCGTGACTTGAAGCCCAGCAACATTTTCATGGACTTTAACTTGCATGTTAGAGTGGCTGATTTTGGACATGCTCGTTTCTTAGGGGATGGAGAAATGGCTCTTACCGGAGAAACAGGAACATATGTGTATATGTCACCAGAGGTGATACGATGTGAGCCTTATAATGAAAAATGTGATGTATACAGTTTTGGAGTCATATTGAACGAGATTCTAACAGGAAAACATCCCTACATTGAGACAGAATATGGTCCTGCCAAGATTGCTATGGAAGTGGTAGAGGGTAAGCTGCGGCCTACACTTCCGTCAAGGGATGATGGTGAGCATTTGGGAGAATTGATTGACCTTATACGCCTTTGTTGGGATGGAACTCCATCCACTAGACCATCCTTTGATACAATCACTCGTATTCTCAAAAGCTATACCAATAGGGTCCTTCATTAA 1344 0.4353 MNTRNSPQIQKSLSRQSSKNSKAKQEPLSPFSGGCCRGFTSVKTVASTTSTLQQHQLQQRYESLEVKVADLEKEVQKQTELRVMYRKRMERTQDYLRYCLQIAQENGILEHIIHSKGELQHSPLSVYNVSSITNSPRIPTHSPKHQHHPNLEAIIDQAKINGWYINPTEIQLEDKIGQGTTAEIHRGTWRGFDVAVKCISPEFFRTNANGVEFFAQEVETLSKQRHRFVLNLMGACLDPPNHAWVVTEYLSTTLKEWLYGPGKRRRDRIVPLPPFKERLTRVIEIAQAMQYLHEQKPKIIHRDLKPSNIFMDFNLHVRVADFGHARFLGDGEMALTGETGTYVYMSPEVIRCEPYNEKCDVYSFGVILNEILTGKHPYIETEYGPAKIAMEVVEGKLRPTLPSRDDGEHLGELIDLIRLCWDGTPSTRPSFDTITRILKSYTNRVLH* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3798 447 SMART serkin_6 170 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3798 447 Gene3D Phosphorylase Kinase; domain 1 152 251 - -
Mtr3g3798 447 CDD STKc_MAP3K-like 176 438 - -
Mtr3g3798 447 ProSitePatterns Protein kinases ATP-binding region signature. 176 197 IPR017441 GO:0005524
Mtr3g3798 447 Coils Coil 54 88 - -
Mtr3g3798 447 MobiDBLite consensus disorder prediction 1 27 - -
Mtr3g3798 447 ProSiteProfiles Protein kinase domain profile. 170 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3798 447 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 21 445 - -
Mtr3g3798 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 299 311 IPR008271 GO:0004672|GO:0006468
Mtr3g3798 447 Pfam Protein kinase domain 172 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3798 447 SUPERFAMILY Protein kinase-like (PK-like) 136 437 IPR011009 -
Mtr3g3798 447 PANTHER OS09G0443600 PROTEIN 21 445 - -
Mtr3g3798 447 Gene3D Transferase(Phosphotransferase) domain 1 272 446 - -
Mtr3g3798 447 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3798 Mtr-Chr3 51807259 51811567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3798 163 445 MAP Kinase Kinase Kinase AT2G17700 35.211 1.48e-47 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Mtr3g3798 Pkinase 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3798 - - gmx:100810435 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3798 3 51807259 51811567 Mtr3g3798 3 51807259 51811567 ECH