Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3796 ATGAAAGCGTTCGCAATATCATCGTCACTATTAGCATTGAAATCTTTGAATTTCAACCACACTCGAAATCGAATCTCCAATAATCCCTTTCTTTTCTCCAACAAAACTCTCTTCTTTCGCCAAATCCACTCTTCCCCTTCTCCAATCATGGCTGCTTCATCCATCAATTCAGAATTAGCACGTTCACCACCCGCAATTCCCTTGCCCACCCCACCTCTCACTAATTTCAAGATTGGTCTCTGTCAACTCTCAGTCACCTCCGATAAGGACAAAAACATCGCCCACGCACGCACTGCTATTCAAGACGCTGCTGCAAAGGGTGCTAAGCTCATTCTTCTACCAGAAATTTGGAACAGTCCTTATTCAAATGATAGTTTTCCTGTTTATGCTGAGGATATTGATGCTGGTGGTGATGCTTCTCCTTCCACTGCTATGCTTTCTGAACTCTCTAGTTTGTTGAAAATTACCATCGTTGGTGGTTCTATTCCTGAACGTTCTGGAGATCGATTATATAACACTTGTTGTGTCTTTGGCACCGATGGAAAACTCAAAGCAAAGCACCGTAAGATACATCTTTTTGATATTGACATCCCCGGGAAGATTACCTTCATTGAATCATTGACTCTTACTGCTGGGGATACTCCAACGATTGTTGACACAGAGGTTGGACGCATTGGCATAGGCATATGCTATGACATTAGGTTTCCAGAACTAGCAATGATATACGCTGCAAGAGGTGCTCACTTGCTCTGCTATCCTGGGGCTTTTAACATGACAACTGGTCCATTGCATTGGGAGTTATTGCAGAGGGCAAGGGCTACAGATAATCAGTTATATGTGGCAACCTGTTCACCTGCTCGGGATACTACTGGTGGTTATGTGGCTTGGGGTCACTCCACTCTTGTTGGTCCTTTTGGAGAAGTTTTGGCTACTACAGAACACGAGGAGACAACCATTATAGCTGAAATTGATTACTCAATACTGGAACAGAGAAGGACAAACCTCCCTGTGACTAAGCAACGGCGAGGTGATCTTTATCAATTGGTAGATTTGCAGAGGCTGAATTCCAACTGA 1074 0.4367 MKAFAISSSLLALKSLNFNHTRNRISNNPFLFSNKTLFFRQIHSSPSPIMAASSINSELARSPPAIPLPTPPLTNFKIGLCQLSVTSDKDKNIAHARTAIQDAAAKGAKLILLPEIWNSPYSNDSFPVYAEDIDAGGDASPSTAMLSELSSLLKITIVGGSIPERSGDRLYNTCCVFGTDGKLKAKHRKIHLFDIDIPGKITFIESLTLTAGDTPTIVDTEVGRIGIGICYDIRFPELAMIYAARGAHLLCYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDTTGGYVAWGHSTLVGPFGEVLATTEHEETTIIAEIDYSILEQRRTNLPVTKQRRGDLYQLVDLQRLNSN* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3796 357 Pfam Carbon-nitrogen hydrolase 78 328 IPR003010 GO:0006807
Mtr3g3796 357 Gene3D - 74 351 IPR036526 -
Mtr3g3796 357 PANTHER OMEGA-AMIDASE, CHLOROPLASTIC-LIKE 37 356 - -
Mtr3g3796 357 ProSitePatterns Uncharacterized protein family UPF0012 signature. 226 246 IPR001110 -
Mtr3g3796 357 SUPERFAMILY Carbon-nitrogen hydrolase 73 341 IPR036526 -
Mtr3g3796 357 PANTHER NITRILASE-RELATED 37 356 - -
Mtr3g3796 357 CDD nit 77 342 IPR045254 GO:0016811
Mtr3g3796 357 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 76 325 IPR003010 GO:0006807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3796 Mtr-Chr3 51779196 51784855 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3796 K13566 - gmx:100817195 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3796 3 51779196 51784855 Mtr3g3796 3 51779196 51784855 ECH
Mtr3g3796 3 51779196 51784855 Mtr1g0017 1 233998 239547 ECH