Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3793 ATGAGTTTAAGAACAACCCAACAAGATGATTCATCTTCAGAAATTCACATACCAGCTGAAATTGATTGGCACATGCTTGATAAATCTAAGTTTTTCTTCCTTGGCGCCGCCTTATTCTCCGGTGTTTCAGCAGCCCTTTATCCAATGGTTGTGTTGAAAACTCGACAACAGGTTTCTTCTTCACACTACTCTTGTATCAACATGTCATGTGCTATTATGCGTTACGAAGGTTTTAGAGGTTTTTATAAAGGTTTTGGTACTTCTTTAATGGGTACTATCCCTGCTAGAGCACTTTATATGACAGCACTTGAAGTTACTAAGAGTAACGTTGGTACTGCTTTTGTTGAATTGGGTTTTTCTGATAATACTGCTACTGCTGTGGCTAGTGCTGCTGCTGGTGTTGCTTCTGCTATGTCCGCGCAATTGGTTTGGACACCAATTGATGTTGTTAGTCAAAGACTTATGGTTCAAGGTAGTTGTAATAGTGGAGGGAAGAGTATTTTGTCTAATCTTAACTCTGAGAATTATAGAAATGGTTTTGATGTGTTTAGGAAAATTCTTTGTGCTGATGGACCAAGAGGGTTTTATAGAGGATTTGGGATTTCAATTTTGACTTATGCACCTTCTAATGCTGTTTGGTGGACTTCTTATAGTATGGTTCATAGGTTTATTTGGAGTAGTTTTGGTTCATGTTTGGGTAATAGGGAACAAAATTTGGATAATGGGTGTGTTGGTTTTAGGCCTAATTCTAAGGCAGTGGTGGGTGTACAAGGTTTGAGTGCTGTTGTGGCAAGTGGGGTTTCTGCAATTGTAACAATGCCTTTTGATACAATTAAGACTAGGTTGCAGGTTTTGGATACAGAGGAGAATGGTAGAAGGAGGCCTTTAACTTTTGTGCAAACAGTTAGGAATTTGGTGAATGAAGGTGGTTTGTTTGCTTGTTACAGAGGATTGGGACCAAGGTGGGTTTCAATGTCTATGTCTGCTACCACTATGATTACTACTTACGAGTTTTTGAAACGCATGTCTACAAAGAGGCAAGATTGA 1047 0.3906 MSLRTTQQDDSSSEIHIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPMVVLKTRQQVSSSHYSCINMSCAIMRYEGFRGFYKGFGTSLMGTIPARALYMTALEVTKSNVGTAFVELGFSDNTATAVASAAAGVASAMSAQLVWTPIDVVSQRLMVQGSCNSGGKSILSNLNSENYRNGFDVFRKILCADGPRGFYRGFGISILTYAPSNAVWWTSYSMVHRFIWSSFGSCLGNREQNLDNGCVGFRPNSKAVVGVQGLSAVVASGVSAIVTMPFDTIKTRLQVLDTEENGRRRPLTFVQTVRNLVNEGGLFACYRGLGPRWVSMSMSATTMITTYEFLKRMSTKRQD* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3793 348 SUPERFAMILY Mitochondrial carrier 24 339 IPR023395 -
Mtr3g3793 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 109 IPR018108 -
Mtr3g3793 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 223 IPR018108 -
Mtr3g3793 348 Gene3D Mitochondrial carrier domain 30 348 IPR023395 -
Mtr3g3793 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 348 - -
Mtr3g3793 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 348 - -
Mtr3g3793 348 Pfam Mitochondrial carrier protein 257 345 IPR018108 -
Mtr3g3793 348 Pfam Mitochondrial carrier protein 40 109 IPR018108 -
Mtr3g3793 348 Pfam Mitochondrial carrier protein 125 225 IPR018108 -
Mtr3g3793 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 252 342 IPR018108 -
Mtr3g3793 348 PRINTS Mitochondrial carrier protein signature 36 49 IPR002067 GO:0055085
Mtr3g3793 348 PRINTS Mitochondrial carrier protein signature 139 157 IPR002067 GO:0055085
Mtr3g3793 348 PRINTS Mitochondrial carrier protein signature 196 214 IPR002067 GO:0055085
Mtr3g3793 348 PRINTS Mitochondrial carrier protein signature 261 283 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3793 Mtr-Chr3 51764761 51766512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3793 14 348 Chloroplast and Mitochondria Gene Families AT5G26200 66.866 2.03e-162 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3793 K15121 - gmx:100784202 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3793 3 51764761 51766512 Mtr3g3793 3 51764761 51766512 ECH