Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3789 ATGGTACCAATAGCAAAAAAAAATATGACAGATAAAAATCCAATATCACCAAATTCACCTGACAGCGATTTCACCAATCAGTGGTCTTTGGAACTCTCTGAGTACTTGAAATTTGACGATGATATATGGCCAGATGATGATACTGAGCCATTTGTGTCTGAACATGTCCCGAACCGTGACATTCAACAAGCTAATGAATTTGTAGGTGATTTTGGAGGAAGTGGAAGCCAAATTGATGGGTCTTCTAGTAGAGGTGTCAGCAATGAAGGTGAGAAGAAGGAAATTAGAGATCATAAAGTTGCATTCAAAACCAAGTCAGAGGTTGAAATTCTGGATGATGGGTTCAGATGGAGGAAGTACGGAAAGAAGATGGTGAAAAACAGCCCCAATCCAAGGAACTACTATAGGTGTTCAGCGGATGGATGCCAAGTGAAAAAGAGAGTTGAGAGAGATGTGGACGATCCAAGTTATGTAATAACAACCTACGAAGGCACACATACTCATCCAAGTTCTCACTAG 519 0.4046 MVPIAKKNMTDKNPISPNSPDSDFTNQWSLELSEYLKFDDDIWPDDDTEPFVSEHVPNRDIQQANEFVGDFGGSGSQIDGSSSRGVSNEGEKKEIRDHKVAFKTKSEVEILDDGFRWRKYGKKMVKNSPNPRNYYRCSADGCQVKKRVERDVDDPSYVITTYEGTHTHPSSH* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3789 172 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 11 171 IPR044810 GO:0003700
Mtr3g3789 172 MobiDBLite consensus disorder prediction 1 26 - -
Mtr3g3789 172 MobiDBLite consensus disorder prediction 66 93 - -
Mtr3g3789 172 SUPERFAMILY WRKY DNA-binding domain 104 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr3g3789 172 SMART WRKY_cls 111 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g3789 172 MobiDBLite consensus disorder prediction 11 26 - -
Mtr3g3789 172 ProSiteProfiles WRKY domain profile. 106 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g3789 172 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 11 171 - -
Mtr3g3789 172 Pfam WRKY DNA -binding domain 112 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g3789 172 Gene3D WRKY domain 98 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3789 Mtr-Chr3 51741767 51742894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3789 99 170 WRKY Transcription Factor Family AT5G26170 81.944 3.23e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr3g3789 WRKY 2.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3789 - - gmx:100819462 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3789 3 51741767 51742894 Mtr3g3789 3 51741767 51742894 ECH