Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3785 ATGGAGGAGATGTCAGTTGCAGTGCCATTAATAGCAGGTAATTCAGTGTGTGATAATCAAACCATAGCTACTCACATGGATGTTTCGGCAATTAAGATGATGGCCAATGCAGAGCTGATATCAAATGCTATAACTACGATATCCGCTGATACTACTTTTATTAGTTCTGGTGAGGATCATATTGGTGACAATCTGGACGATGTGGTTGGTGTTTCAGCAGTCCCACCGCCTTTGCATGGGAGAGAAGGGGAAATTCTTTTGTTGAATATGATATCTCAAAGTAGCGATGAACTTTTAGTCCCAGAAGTTGACGAGGATGATTCATTATCATTGGAAGGGGATCCAATTATTTATAGCACTCTATCAGTAACTAGCGAGAATGGTAGTGTTTGTGGAGATGAATTCTTCAGCGCTGAAGATAATTCGTATTTTAGGGCAAGGAGTTCGATGGACATAGATAAGAACATATCCTCTGTCGAAATTGTTGCTAGGGCTGCTGTTATCGACGAGTCAAATGTGGAGACAGATATTATGAGTGAACCTCTTGCTGTAGCATTGAGCATTGGAGACGAAACAGGAGTTAGATCAGTACCGTTGCCTACTACAGTTGCTCTTCATCAACTGCCTCTTAAAAAAGGGGTGAGTGGAACAGTTGGTCGGAGTGTTTTTGAATTGGATTGTACCCCACTTTGGGGGTTTACATCTTTATGTGGAAAGAGACCTGAGATGGAAGATGCTGTTGCGATTGCACCTCGGATGTTGAAAATTCCTATTCAAATGCTAAATGGTAACAGCAAATATGATGGAATGAACAAGGATGGAATGAACAAGGATTTTAGTCAGCAGACAATTCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTTGCAAATTATTGTCGAGATCGTATGCATTTGGCCTTAATTGAGGAGATAGAATTGTTCAAGGAAGGTCTAATAATTGGAGGTACCAAGGATGATTGTCAAGATTTATGGAAAAAAGCTTTCACTAATTGTTTTTCAAAAGTTGACGATGAAGTTGGGGGAAAAGTTAACGGTGATCCTGTTGCACCAGAAACTGTTGGTTCCACTGCCGTTGTAGCTATTGTTTGTTCATCCCATATCATTGTTTCAAATTGTGGTGATTCGAGAGCGGTTCTATGTCGTGGAAAAGAACCGATGCCTTTATCTGTGGATCATAAACCAAATCGAGATGATGAATATGCAAGAATCGAGGCAGCTGGTGGCAAGGTGATACAATGGAATGGTCATCGTGTATTTGGGGTTCTTGCAATGTCAAGGTCTATTGGTGATAGATATTTGAAGCCATCAATTATTCCCGAACCAGAAGTTACATTCATCCCTCGTGCAAAAGATGATGAATGTCTCATTTTGGCTAGTGATGGCTTGTGGGATGTCATGACAAATGAAGAGGCATGCGACTTAGCTCGTAGGCGCATACTTCTTTGGCACAAGAAAAATGGCTCAAAGCTGTCCTTAGTAAGGGGAGAGGGAATCGATCTTGCCGCACAGGCAGCTGCAGAGTACCTATCAAACCGTGCTTTGCAGAAAGGAAGCAAAGATAACATCACTGTCGTCGTAGTAGATTTGAAAGCTCAGCGAAAATTTAAGACTAAAACATGA 1650 0.4145 MEEMSVAVPLIAGNSVCDNQTIATHMDVSAIKMMANAELISNAITTISADTTFISSGEDHIGDNLDDVVGVSAVPPPLHGREGEILLLNMISQSSDELLVPEVDEDDSLSLEGDPIIYSTLSVTSENGSVCGDEFFSAEDNSYFRARSSMDIDKNISSVEIVARAAVIDESNVETDIMSEPLAVALSIGDETGVRSVPLPTTVALHQLPLKKGVSGTVGRSVFELDCTPLWGFTSLCGKRPEMEDAVAIAPRMLKIPIQMLNGNSKYDGMNKDGMNKDFSQQTIHFFGVYDGHGGSQVANYCRDRMHLALIEEIELFKEGLIIGGTKDDCQDLWKKAFTNCFSKVDDEVGGKVNGDPVAPETVGSTAVVAIVCSSHIIVSNCGDSRAVLCRGKEPMPLSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPSIIPEPEVTFIPRAKDDECLILASDGLWDVMTNEEACDLARRRILLWHKKNGSKLSLVRGEGIDLAAQAAAEYLSNRALQKGSKDNITVVVVDLKAQRKFKTKT* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3785 549 SUPERFAMILY PP2C-like 226 540 IPR036457 -
Mtr3g3785 549 ProSiteProfiles PPM-type phosphatase domain profile. 230 539 IPR001932 -
Mtr3g3785 549 SMART PP2C_4 220 537 IPR001932 -
Mtr3g3785 549 CDD PP2Cc 232 539 IPR001932 -
Mtr3g3785 549 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 103 549 - -
Mtr3g3785 549 Pfam Protein phosphatase 2C 274 532 IPR001932 -
Mtr3g3785 549 Gene3D - 217 549 IPR036457 -
Mtr3g3785 549 PANTHER ALPHABET, ISOFORM E-RELATED 103 549 - -
Mtr3g3785 549 ProSitePatterns PPM-type phosphatase domain signature. 286 294 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3785 Mtr-Chr3 51722791 51727098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3785 161 549 PP2C-type Phosphatase Gene Family AT1G17550 58.500 3.24e-160 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3785 K14497 - gmx:102662702 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3785 3 51722791 51727098 Mtr3g3785 3 51722791 51727098 ECH