LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr3g3784	ATGGAGGATCTTCAGGAGGGAGAGAATGGAGGAGAAGAAGAGGTGCTTGGTTCAAGCTTGACTATGGAGAAAGTAGCAGCTGCTAAGAAATTCATTGAGAATCATTACAGGGCACAGATGAAAAATATTCAAGATCGGAAAGAGAGGCGTTGGGTATTGGAAAGAAAATTAGCTACTTCGGATGTGCCAACTGAAGAACGGCTCAACCTCATCAAAGATTTAGAGAGGAAGGAAACTGAATATATGCGATTGAAAAGACACAAGATTTGTGTTAATGATTTTGATCTCTTGACCATCATTGGAAGGGGGGCTTTTGGGGAGGTTAGACTGTGTCGGGAAAAGAAATCTGGAAATATCTATGCCATGAAAAAGCTGAAGAAATCTGAAATGCTCAGGAGAGGCCAGGTAGAACATGTTAGAGCTGAGAGGAACTTACTGGCCGAAGTCGCCAGTCACTGCATTGTGAAACTTTACTACTCATTTCAAGATACTGAATACTTGTATTTAATTATGGAGTATCTGCCCGGGGGTGACATCATGACTCTGCTTATGAGGGAAGACACCTTAAGTGAGAACGTGGCTAGATTTTACATGGCACAGAGTGTTCTGGCCATAGAGTCTATTCATAAGCACAATTACATTCACAGAGATATCAAACCCGATAACCTACTTCTGGATAAAAATGGTCATATGAAGCTCTCCGATTTTGGCCTCTGTAAGCCTATCGATTGCATTACCTTGCCTACACTGCATGAAAATCAGACCATGGATGATGAAACTTTGGCAGAGCCAATGGATATCGATAGTTGTGTTCCTGATGCGGACAATCGGAAAAGCTGGAGAAGCCCGCGTGAGCAGCTTCAGCATTGGCAGATGAATAGGAGGAAGTTGGCATTTTCAACAGTAGGGACGCCAGATTACATTGCTCCTGAAGTACTTTTGAAAAAAGGATATGGGATGGAATGTGATTGGTGGTCACTGGGAGCGATAATGTACGAAATGCTGGTCGGTTACCCTCCATTTTACTCTGATGACCCAATAACCACATGCAGAAAGATTGTTCATTGGAGAAACCATTTAAGATTTCCAGAAGATCCCCATGTAACACATGAGGCCAAGGATTTAATCTACAGATTGCTGTGTGATGTTGATCACAGGTTAGGTACCCGAGGGGCACAAGAAATCAAGGCTCATCCATGGTTCAAGGGTGTCGAGTGGGATAAACTATATGAAATGGAGGCAGCATTTAAACCACAAGTCAATGGGGAACTGGATACCCAAAACTTTATGAAGTTTGATGAGGTAGAATCACCAGATGCGGCAAGAGCTGGATCCGGATCTTCAAGAAAGATGCTTCTAACTCCCAAAGATCTAAACTTTGTTGGTTACACTTACAAGAACTTCGATGCGGTTAAAGAAGGTCTTCGTCAATCTTTGAGTGAGTCCATGCAAGATTATGCTTCCAAACGAACAACCGATGAAACTGGCTTGCAAATGCTCGCGTCGTCTGGAGATCCTATGCTACCATAA	1530	0.4288	MEDLQEGENGGEEEVLGSSLTMEKVAAAKKFIENHYRAQMKNIQDRKERRWVLERKLATSDVPTEERLNLIKDLERKETEYMRLKRHKICVNDFDLLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLRRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDIMTLLMREDTLSENVARFYMAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPIDCITLPTLHENQTMDDETLAEPMDIDSCVPDADNRKSWRSPREQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWRNHLRFPEDPHVTHEAKDLIYRLLCDVDHRLGTRGAQEIKAHPWFKGVEWDKLYEMEAAFKPQVNGELDTQNFMKFDEVESPDAARAGSGSSRKMLLTPKDLNFVGYTYKNFDAVKEGLRQSLSESMQDYASKRTTDETGLQMLASSGDPMLP*	510

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr3g3784	509	Gene3D	Phosphorylase Kinase; domain 1	85	179	-	-
	Mtr3g3784	509	SMART	serkin_6	94	401	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr3g3784	509	SUPERFAMILY	Protein kinase-like (PK-like)	91	443	IPR011009	-
	Mtr3g3784	509	ProSitePatterns	Protein kinases ATP-binding region signature.	100	123	IPR017441	GO:0005524
	Mtr3g3784	509	Pfam	Protein kinase C terminal domain	420	465	IPR017892	GO:0004674\|GO:0005524\|GO:0006468
	Mtr3g3784	509	Pfam	Protein kinase domain	293	401	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr3g3784	509	Pfam	Protein kinase domain	96	242	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr3g3784	509	ProSiteProfiles	Protein kinase domain profile.	94	401	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr3g3784	509	ProSiteProfiles	AGC-kinase C-terminal domain profile.	402	475	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
	Mtr3g3784	509	PANTHER	SERINE/THREONINE-PROTEIN KINASE	13	488	-	-
	Mtr3g3784	509	CDD	STKc_NDR_like	92	466	-	-
	Mtr3g3784	509	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	213	225	IPR008271	GO:0004672\|GO:0006468
	Mtr3g3784	509	MobiDBLite	consensus disorder prediction	485	499	-	-
	Mtr3g3784	509	Gene3D	Transferase(Phosphotransferase) domain 1	180	418	-	-
	Mtr3g3784	509	MobiDBLite	consensus disorder prediction	485	509	-	-
	Mtr3g3784	509	PANTHER	AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN	13	488	-	-
	Mtr3g3784	509	SMART	pkinase_C_6	402	467	IPR000961	GO:0004674\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr3g3784	Mtr-Chr3	51709315	51717898	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr3g3784	1	508	AGC Kinase Gene Family	AT4G33080	79.568	0.0	849

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_NDR	Mtr3g3784		Pkinase	2.7e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr3g3784	K08790		-	gmx:100815717	939.102

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr3g3784	3	51709315	51717898	Mtr3g3784	3	51709315	51717898	ECH