Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3782 ATGTCTCTTCAAGAGCCATCTGGTCCCCCACAACAAAATGTAACAATGGTGGCTGTTGACAAAGGCAAGAGCAGTGCATATGCTTTTCGTTGGGCCATTAGATGTATCGATAATCCTATCATTATTGCTGTCCATGTTAAAAACAAAAATTTACTTAACCAGGGCACAAATGTTTATCCACCAGATGAAGACGAAGTAGCTCAAATTTTCAATAACTTACGTGCATTGTGTCCAAGTAAAATGGTCACCATGAAAGAAGTTGTAGTTGATGATCAAGATGTTGTGAAAGGACTATTAGATTTTGCAAACAGAAATCTCGTACATAGTCTTGTTATTGGTGCATCAACTAAGAACCTTATGCCAAGTCTAAAAAAATTTAAAGCCTCTCAAGATATACCAACAAGCATAATCAAATCAGCACCAGGTTATTGCTCTGTGTACATAATTTCCAAATTGAAGATTGTATCAACTCGACCCGCGGTACGAGAAATAGGAAACCAGATTATTCCAACAAAACAATTAGCTGTTCAAGTATCCCCTGAATTTGAAAGTGGAATAAGGTCAATACAACCTAGAACTAGTGGCACTAATGAAGGATCAGAATCAAGGTCTTTTGATAGCATTAGTACGGTAAAAGGACCGGCACGTGACAGGCCGAGGAGTGCAGGAAGTAATCAATCAATGGACAACATTGATCCATCTGGTGGTCGTGGAAGACATTGGGCATCAATGGACGAAAGAGAAATTGCAGCACTCGGGCCAATTGTCGATGTAAACAGGCATGAATTGTATCTAATAGATTCCTTTGGGACACATCCAACCTCGCACACCTCGAAAGAACTTGAAGCTGAGATGAAAAGATTGAGGCTTGAATTGAAGCAAACTATGGACATGTACAGCTCAGCTTGCAAACAAGCAATATCAGCAAAAAATCAGGCAGAACAAATTCGTAGATGGAAAGAGGAAGAGGGACGAAAGGTTGTGGAAGTTAGGTTATCTCAGGAGGCAGCTCTAGCAATAGCAGAAAGGGAGAAGGCTAAAGCCAAAGCTGCATTGGAAGCAGCAGAGGAAGCCAAGAGGAAGGCTGAACAGGAGGCACAAAGAAGAAAGGAGGCAGAGATGAAGGCTAGGAAAGAGGCAGAAGAGAGGAATAAAGTATTGAATGCATTGGCTCAAAATGATAATCGATATAGAAAATACACTATGATGGAGATTGAAGTTGCTACCGAGAGATTCTCACCATCAAAGAAACTAGGTGAAGGTGGATACGGACCTGTGTTTAAAGGTCACCTTCATCACACACCAGTTGCAGTCAAACTCTTAAATCCTGAAGCTGCTCAAGGCAGGAAGCAATTCAACCAAGAGGTTGAGGTACTAAGCAGTATTAGACATCCAAATATGGTCCTCCTCCTTGGAGCATGTCCTGAGCATTGTTGTTTGGTGTATGAGTACATGGAAAACGGTACCTTAGAAGATAGATTATTTCGGAAAAATAACTCTAAGCCTCTATCATGGCAAAAAAGGTTCAAAATAGCAGCTGAGATTGCAACTGCACTTCTTTTCCTTCACCAAACAAAGCCAGAGCCAATCGTGCATCGAGACCTTAAACCATCAAACATTTTGTTAGACAAAAATTACGTGAGCAAAGTCGCTGATGTCGGTCTCGCAAGATTAGTTCCTCCTTCTGTAGCTGACAGCGTGACACAATATTACATGACTTCAGCTGCTGGAACATTTTGTTATATTGATCCCGAGTATCAACAAACAGGAATGTTAACACCAAAATCAGATATATATTCATTAGGGATAATGCTACTGCAGATAATCACAGCCAGGCCTCCTATGGGACTTTCTCATCATGTTAAAAGGGCAATTGAAAAGGACCAGTTTTCAGAGATTCTTGATTCTGCGGTGACTGATTGGCCAGTTGAAGAGGCTCTATCATTTGCAAAATTAGCATTGAATTGTGCAGAACTCTGCAAGAAAGATAGGCCAAATCTTGCATCAGTTGTGCTTCCAGAGCTTAATAGATTAAGAGGCCTTGGATTTAATGATAATCAAGTTTTTACTGATACTAAGAATAATAGCCATTCACTACGACCTCCTATGCCTACCTGA 2118 0.406 MSLQEPSGPPQQNVTMVAVDKGKSSAYAFRWAIRCIDNPIIIAVHVKNKNLLNQGTNVYPPDEDEVAQIFNNLRALCPSKMVTMKEVVVDDQDVVKGLLDFANRNLVHSLVIGASTKNLMPSLKKFKASQDIPTSIIKSAPGYCSVYIISKLKIVSTRPAVREIGNQIIPTKQLAVQVSPEFESGIRSIQPRTSGTNEGSESRSFDSISTVKGPARDRPRSAGSNQSMDNIDPSGGRGRHWASMDEREIAALGPIVDVNRHELYLIDSFGTHPTSHTSKELEAEMKRLRLELKQTMDMYSSACKQAISAKNQAEQIRRWKEEEGRKVVEVRLSQEAALAIAEREKAKAKAALEAAEEAKRKAEQEAQRRKEAEMKARKEAEERNKVLNALAQNDNRYRKYTMMEIEVATERFSPSKKLGEGGYGPVFKGHLHHTPVAVKLLNPEAAQGRKQFNQEVEVLSSIRHPNMVLLLGACPEHCCLVYEYMENGTLEDRLFRKNNSKPLSWQKRFKIAAEIATALLFLHQTKPEPIVHRDLKPSNILLDKNYVSKVADVGLARLVPPSVADSVTQYYMTSAAGTFCYIDPEYQQTGMLTPKSDIYSLGIMLLQIITARPPMGLSHHVKRAIEKDQFSEILDSAVTDWPVEEALSFAKLALNCAELCKKDRPNLASVVLPELNRLRGLGFNDNQVFTDTKNNSHSLRPPMPT* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3782 705 SMART serkin_6 412 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3782 705 Gene3D Transferase(Phosphotransferase) domain 1 485 693 - -
Mtr3g3782 705 MobiDBLite consensus disorder prediction 185 240 - -
Mtr3g3782 705 Coils Coil 278 298 - -
Mtr3g3782 705 CDD STK_N 14 151 - -
Mtr3g3782 705 PANTHER OS02G0152300 PROTEIN 14 692 - -
Mtr3g3782 705 CDD STKc_IRAK 418 678 - -
Mtr3g3782 705 Gene3D HUPs 9 124 IPR014729 -
Mtr3g3782 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672|GO:0006468
Mtr3g3782 705 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 14 692 - -
Mtr3g3782 705 Gene3D Phosphorylase Kinase; domain 1 384 484 - -
Mtr3g3782 705 Pfam Protein kinase domain 414 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3782 705 SUPERFAMILY Protein kinase-like (PK-like) 395 671 IPR011009 -
Mtr3g3782 705 Coils Coil 338 390 - -
Mtr3g3782 705 ProSiteProfiles Protein kinase domain profile. 412 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3782 705 MobiDBLite consensus disorder prediction 185 209 - -
Mtr3g3782 705 MobiDBLite consensus disorder prediction 361 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3782 Mtr-Chr3 51688082 51692128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3782 84 687 Receptor kinase-like Gene Family AT5G12000 58.091 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mtr3g3782 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3782 - - gmx:100798861 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3782 3 51688082 51692128 Mtr3g3782 3 51688082 51692128 ECH