Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3778 ATGGGTGCTTCTGGAAAATGGGTCAAAGCATTAATCGGATTCAAGAAACCAGACAAAGATGAACAGCATGTGAAGGAGGGTGGTAAAAGTAAGAAATGGAGGTTATGGAGAAGTTCACCAGGAGATAACAGTTCATGGAAGGGTTTCAAAACAAACCACCACAAAGCAGCTTCTGAAGGGTCTGAATCTCCAACTGCTGCTGAAGCTTACACTGCTGCAGTGGCTACCGTTGTTAGAGCTCAACCTAAGGATTTTAGACTTGTTAGGCAAGAATGGGCTGTTATTAGAATCCAAACCACTTTCCGCGCCTTCTTGGCAAGAAGGGCTTTGAGGGCATTGAAGGCAGTGGTGAGGATTCAAGCACTTGTCAGGGGTAGACAAGTGAGGAAGCAAGCTGCAGTGACATTGAGGTGCATGCAGGCATTAGTTCGTGTTCAAGCTCGAGTAAGAGCTCGTCGTGTGAGGATGTCTATGGAGGGACAAGCCGTGCAGAATATGCTTAATGAACGACGCAGCAAACTTGAACTTTTGAAGGAAGCAGAGGAAGGGTGGTGTGATAGCATAGGAACATTGGACGATGTTAAATCAAAAATTCAAATGAGGCAAGAAGGAGCTTTCAAAAGAGAGAGGGCACTTGCATACTCACTTGCTCAGAAGCAATGCAGGCCAACCTCAAGCACTAATTCGCGAACCAACACCTCATTTTCTACTCTCCGGAATCACGAGATGAACAGAGCTAATGGGGGGTGGAGTTGGTTGGAAAGATGGATGGCAGCCAAGCCTTGGGAGACTAGATTAATGGAACAGTCTCATGCCGAGAGCTTAGAAAAAACCCCACCACCACCTCCAAAGAAATTTGCAGAACCCTTTGTAAGCTCAAATTTGAAACCATGCTCGGTCAAAGTCAAAAAGAACAATGTCACAACAAGGATTTCTGCTAAGCCTCCTCCCCATATTGGACAAGCTACTCGTTCATCGTCAAGTCCAAGTTCTGAGTTTCGGTACGATGAGAGTTCTGCATCATCTTCTATTTGTACATCCACAACTCCAATGTCAGGGAACACTTGTGAAAGGACCGAGGATAGTTGTAACAGCACTAGGCCAAATTACATGAACCTGACTAAATCAACCAAGGCAAAGCTAAAATCGGGTAGTAATCAAATGTATAACAGAGCTCAAAGGCAACAGTCAATGGATGAGTTTCAATTTATGAAGAGGGCTGCAGTTTTCTCTAACGGAGATTCTAAAAGCATAGCTGCTTCTGATCATTCACTCAACTTTTCTAGGCCACTTCGTCTACCAACCCAATCGGACAAGAGCTCGGTGAGACCATGGTGA 1338 0.4499 MGASGKWVKALIGFKKPDKDEQHVKEGGKSKKWRLWRSSPGDNSSWKGFKTNHHKAASEGSESPTAAEAYTAAVATVVRAQPKDFRLVRQEWAVIRIQTTFRAFLARRALRALKAVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQNMLNERRSKLELLKEAEEGWCDSIGTLDDVKSKIQMRQEGAFKRERALAYSLAQKQCRPTSSTNSRTNTSFSTLRNHEMNRANGGWSWLERWMAAKPWETRLMEQSHAESLEKTPPPPPKKFAEPFVSSNLKPCSVKVKKNNVTTRISAKPPPHIGQATRSSSSPSSEFRYDESSASSSICTSTTPMSGNTCERTEDSCNSTRPNYMNLTKSTKAKLKSGSNQMYNRAQRQQSMDEFQFMKRAAVFSNGDSKSIAASDHSLNFSRPLRLPTQSDKSSVRPW* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3778 445 MobiDBLite consensus disorder prediction 269 290 - -
Mtr3g3778 445 MobiDBLite consensus disorder prediction 18 36 - -
Mtr3g3778 445 ProSiteProfiles IQ motif profile. 90 118 IPR000048 GO:0005515
Mtr3g3778 445 MobiDBLite consensus disorder prediction 306 369 - -
Mtr3g3778 445 ProSiteProfiles IQ motif profile. 114 141 IPR000048 GO:0005515
Mtr3g3778 445 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 444 - -
Mtr3g3778 445 Pfam IQ calmodulin-binding motif 114 131 IPR000048 GO:0005515
Mtr3g3778 445 Pfam IQ calmodulin-binding motif 92 111 IPR000048 GO:0005515
Mtr3g3778 445 PANTHER IQ-DOMAIN 5-RELATED 1 444 - -
Mtr3g3778 445 MobiDBLite consensus disorder prediction 419 445 - -
Mtr3g3778 445 Gene3D - 88 137 - -
Mtr3g3778 445 MobiDBLite consensus disorder prediction 18 64 - -
Mtr3g3778 445 SMART iq_5 89 111 IPR000048 GO:0005515
Mtr3g3778 445 SMART iq_5 112 133 IPR000048 GO:0005515
Mtr3g3778 445 MobiDBLite consensus disorder prediction 319 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3778 Mtr-Chr3 51637998 51640882 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3778 1 439 IQD Protein Family AT2G26180 59.050 2.61e-148 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3778 - - gmx:100799714 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3778 3 51637998 51640882 Mtr3g3778 3 51637998 51640882 ECH