Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3777 ATGGTGTTCATGGATTTGGAATGGTTGTTTCCAATTCCAATTAGTGTCTCTTTTGCTTCAACAATATTGGCTTTAGCAGGAGGATGGTTGATTTATCTGTATGAGCCGTATTGGAGGGTAAGGAAGGTTCCTGGTCCACCATCTCTGCCGTTGGTAGGGCACCTTCACTTGCTGGCTAAACATGGCCCTGATGTTTTCTCAGTCCTTGCCAAGCAATATGGTCCAATTTACAGATTTCATATGGGAAGACAGCCACTAATAATAGTAGCAGATGCAGAACTGTGTAAAGAGGTTGGAATCAAAAAATTTAAAGACATTCCAAACAGAAGCACTCCCTCTCCTATTAAAGCTTCTCCACTTCACCAAAAGGGTCTCTTCTTCAGCCGGGATTCACAATGGTCTACAATGAGAAACACCATATTGTCGGTATATCAACCATCACACCTATCAAGATTAGTGCCAACAATGCAATCATTCATAGAATCTGCCACTCAAAATCTTGACTCACAAAAAGAAGACATTTTCTTTTCTAATTTATCACTTAAACTCGCGACTGACGTGATTGGACAAGCAGCCTTTGGTGTCAACTTTGGCCTCTCTCAATCTCATTCCGTTCACAACGAAAGCAAGAATGTTGCTACTGATAACAAGGACTTAATGAATGCAAGTGGTAGTAATGAAGTAACTGACTTCATTAATCAACACATATACTCAACAACTCAACTTAAGATGGACTTGTCAGGTTCTTTCTCAATCATACTTGGTCTACTTGTTCCGATTCTTCAGGAACCATTTAGGCAGATTTTGAAGCGAATACCGGGTACCATGGATTGGAAAATTGAGCGTACTAATGAAAAACTAGGTGGCCGTCTTGACGAGATTGTAGAGAAAAGAACGAAAGATAGAACACGTAGTTCAAAGGATTTTTTGTCGCTTATCCTAAATGCTAGAGAATCAAAAGCTGTTTCGGAAAATGTTTTCACACCTGAATATATCAGTGCTGTTACTTATGAGCACTTGCTTGCTGGATCAGCAACCACTTCCTTTACATTGTCTTCTGTTGTATATTTGGTTGCTGCACATCCAGAAGTTGAGAAAAAGATGCTTGAAGAGATTGATGGGTATGGTTCACTAGATCAGATACCTACTTCCCAAGATCTTCATGACAAGTTTCCTTATCTTGATCAGGTGATCAAAGAGGCAATGAGATTTTACATTGTATCACCATTAGTTGCAAGAGAAACATCGAATGAAGTAGAGATTGGAGGTTACCTTCTTCCAAAGGGGACTTGGGTTTGGTTAGCCCTTGGAGTTCTAGCAAAAGATCACAAAAACTTTCCAGAGCCAGAAAAGTTCAAACCAGAAAGGTTTGACCCTAACTGCGAAGAAATGAAACAAAGACACCCTTATGCTTTCATACCATTTGGAATTGGTCCTAGAGCTTGCATTGGTCAGAAATTTTCCATGCAAGAGATCAAGCTTTCACTTATTCATTTATACAAAAAATACTTGTTTCGGCATTCAGCTGATATGGAAAGCCCTTTAGAACTCGAGTATGGAATAGTCCTCAACTTCAAGCATGGTGTCAAGTTCAGTGTCATAAAAAGAACAGAGATGAGCTGCTAA 1626 0.3961 MVFMDLEWLFPIPISVSFASTILALAGGWLIYLYEPYWRVRKVPGPPSLPLVGHLHLLAKHGPDVFSVLAKQYGPIYRFHMGRQPLIIVADAELCKEVGIKKFKDIPNRSTPSPIKASPLHQKGLFFSRDSQWSTMRNTILSVYQPSHLSRLVPTMQSFIESATQNLDSQKEDIFFSNLSLKLATDVIGQAAFGVNFGLSQSHSVHNESKNVATDNKDLMNASGSNEVTDFINQHIYSTTQLKMDLSGSFSIILGLLVPILQEPFRQILKRIPGTMDWKIERTNEKLGGRLDEIVEKRTKDRTRSSKDFLSLILNARESKAVSENVFTPEYISAVTYEHLLAGSATTSFTLSSVVYLVAAHPEVEKKMLEEIDGYGSLDQIPTSQDLHDKFPYLDQVIKEAMRFYIVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDHKNFPEPEKFKPERFDPNCEEMKQRHPYAFIPFGIGPRACIGQKFSMQEIKLSLIHLYKKYLFRHSADMESPLELEYGIVLNFKHGVKFSVIKRTEMSC* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3777 541 PRINTS P450 superfamily signature 342 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g3777 541 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g3777 541 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g3777 541 PRINTS P450 superfamily signature 482 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g3777 541 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g3777 541 PRINTS E-class P450 group I signature 331 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g3777 541 PRINTS E-class P450 group I signature 351 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g3777 541 PRINTS E-class P450 group I signature 395 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g3777 541 PRINTS E-class P450 group I signature 435 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g3777 541 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g3777 541 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g3777 541 PANTHER THROMBOXANE-A SYNTHASE 15 537 - -
Mtr3g3777 541 Pfam Cytochrome P450 44 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g3777 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Mtr3g3777 541 PANTHER CYTOCHROME P450 FAMILY PROTEIN 15 537 - -
Mtr3g3777 541 SUPERFAMILY Cytochrome P450 36 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g3777 541 Gene3D Cytochrome P450 31 540 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3777 Mtr-Chr3 51628516 51637951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3777 81 536 Cytochrome P450 AT2G26170 73.246 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3777 K20771 - gmx:100797803 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3777 3 51628516 51637951 Mtr3g3777 3 51628516 51637951 ECH
Mtr1g0362 1 4154421 4158273 Mtr3g3777 3 51628516 51637951 PCT