Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3768 ATGAGAATAGCTAGGAAATGCTCATATTGTGGAAACTTTGGTCACAATTCAAGGACTTGCAATAACAGTCTCAAAGAGCAATTTCATCTTTATTCTTCTTCACCTTCATATTTGCCAACAAAAAGGAGTATCAGAAAGAACTACCTGCCATCATCGCGGACCTCTTTGTCAATAGCCTCCTCCTGGCCTACCCTGTTTGGTTCAAATGAAAATTCAGATAGTTGCGTAAGAAACTGGCACACATCAACAATTAGACCCAGTAAAAAAGGTATGCCGTGGACCGAGGAGGAGCACATGATATTTCTTAGAGGACTTGAGAAGCTTGGGAAGGGTAACTGGAGAGGTATATCTAGAGATTTTGTAACAACAAAAACACCAACCCAGGTGGCTAGTCATGCACAAAAACATTTTCTCCGTCAGTCTCAGAATAGTTTGGTCAATAGAAGAAAACACCATCTTAGCCTCCATAATGTGGGATGTGAAAAACCAGGAATAAATTTGACTCCAAATGATATCAGCTGCATAAGCCAACTAAGTGGAAGTAGAAATTTTCTTTCTCAGTTGCTTTCTCATCCTCAACATTCAATGCTGAAATGGCCCAACTCTTCAACATCAACGAATTGTACTCCTCATAGTGCAGCACCTGATTTAGAACTCAAACTTGCAACTCCCATGCCATTAGAGCCAACATCCCCTTAA 699 0.4049 MRIARKCSYCGNFGHNSRTCNNSLKEQFHLYSSSPSYLPTKRSIRKNYLPSSRTSLSIASSWPTLFGSNENSDSCVRNWHTSTIRPSKKGMPWTEEEHMIFLRGLEKLGKGNWRGISRDFVTTKTPTQVASHAQKHFLRQSQNSLVNRRKHHLSLHNVGCEKPGINLTPNDISCISQLSGSRNFLSQLLSHPQHSMLKWPNSSTSTNCTPHSAAPDLELKLATPMPLEPTSP* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3768 232 PANTHER TRANSCRIPTION FACTOR KUA1 4 169 - -
Mtr3g3768 232 SUPERFAMILY Homeodomain-like 86 141 IPR009057 -
Mtr3g3768 232 CDD SANT 92 137 IPR001005 -
Mtr3g3768 232 ProSiteProfiles Myb-like domain profile. 85 137 IPR001005 -
Mtr3g3768 232 PANTHER TRANSCRIPTION FACTOR KUA1 4 169 - -
Mtr3g3768 232 MobiDBLite consensus disorder prediction 199 232 - -
Mtr3g3768 232 Pfam Myb-like DNA-binding domain 91 136 IPR001005 -
Mtr3g3768 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 141 IPR017930 -
Mtr3g3768 232 SMART sant 89 139 IPR001005 -
Mtr3g3768 232 Gene3D - 91 142 - -
Mtr3g3768 232 ProSiteProfiles SANT domain profile. 88 141 IPR017884 -
Mtr3g3768 232 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 88 140 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3768 Mtr-Chr3 51520091 51521671 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr3g3768 Myb_DNA-binding 1.4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3768 - - mtr:MTR_3g104370 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3768 3 51520091 51521671 Mtr3g3768 3 51520091 51521671 ECH