Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3718 ATGGCTTCTCGTTCAGTACCTCCTGATATCAACATAAAACCTGAGCATTGTCCAGAAGCTGTAAGAGAATGGTACCGCTTAACAGGACTACAAGATCGTAAAGAAAGTGCTGGTAGAAAGAATTTGGCTTTGAAAGCAAAACAACATCTTCTTTCTTTGGGTTGGAAGTTTTGGTACATTGACAAAAATTGCAAGTGGGAATTGCGTTATACTTCTCCTAACAATGGGAAAAACCATATTACTCTTAGAAAAGCCTGTGAGAGTTGCATTGAAGAAGGAGGGTGTTCCCCCGAACGCCCTTCAACTGCAGCAATAACGTCAATTTCTTCGCCTCCACTACAGTTGAAAAAGAGATCGAGAGAATCCGAGGAAACAGAAGGAACAACAATTTCTCTGTCTCCATTGCAGTCGAAAAAGAGACCGAGAGAATCTGAGGAAACAGCAGCAATATCAATTTATTCGTCTCCTTTACAATCGAAAGAGCTACCGAGAGAATCCCAGGAAGCAGCAGCAACATCAATCTATTGGTCTCCATTGCCGTCGAAAGAGAAACTGAGAGAATCCGAGGAGGAAGCAGCAGCAACTACAATTTCTTTGTCTCCATTAAAGCGACCGAGTGAATCCGAGGAAGCAGCAGCAATATCAATTTCTTCTGAATCAGATGAATCAACTTCTGATGACGATTCTGAAGCCTCTAGTGCCAGTTCTGAATCAACTTCTGATGAGGATTCTGAAACCTCTAGTTCCGGGGATGTTAATAAGGCTATAGTAGGTACGGTACCAACATCAATGGAAAATGAGAAGCATGTGAGTAAATTTGAATCAGAACTTAATGATTCGGTAGGTAGTGATAAAAGAGGAAAGGTTTTAAAAACGAGTTTAATGGAGAAGAATTCAGAGGATTGTGGTAGAAGAGGGAAAGTATTAAAGACAAGTATAATGGAGAAAAATTCAGAGGCTTCTAGTAAGAGAGGGAAGGTATCAAAGACGGAAGGTAAAAGAGAAAGGTATTCACTAGTTTCTTGGTTGATAAAGAATCAAGTTTTGGTTTCAGGGACTAATGTATTCTGTCGTGGTAGAAACAATGTTGTCAAAAGAGGGGGTTTATTTTCTGATGGCATAGTTTGTGATTGTTGTCGTGTTAATTTCAATGTCACTGGATTTGAGGCTCATGCTGGTTGTACAAGACATAGACCAACCACTAGTATCTTGTTGGGAGATGGAAGGTCGTTGTTGGACTGTCAAAGGGAAGCTCTTAGTTCACGTGATGAAAAGCGGAATCATTGTATTGCTGAAGCAAATTCTGAAGCAGGGAATCATTGTGTTGCCCAATTAAATTCTGACGCGGGGAATCATTATGTTGCTGAAGGAAATTCTGATGTACTAGTAAATTCTGAAGCGGGGAATCATTGTGTCGCCGAAGGAAATTCTGAAGTAGGGAATCACTGTGTTGCCAAAGCAAATTATGAAGCAAATAACGATACTGTTTGTTCTATTTGTGATTTGGGAGGTGACATAGTACTGTGTGATCAATGTCCTTCTGCATTCCACCTCAGTTGTTTAGGTCTCGATCGAGTTCCGGATGGCGATTGGTTCTGTCCAACATGTTGTTGCAAAATATGCTATCGACCCAAATGCAAGCAAGAATGTGCAGATGGCAATGACAGCAATATTCTTGTTTGTGTTCAATGTGCACAAAAGTTTCATTTTGGGTGTGTAAAGGCTTTAGGACTTGGATCAAGTCACATTGAGAGCAATGGTGAAAAGAAGAATTGGTTTTGCAGTGTAGTTTGTGGTAACATGTTCTTATGTCTAAAGAAGTTGTCAGGGAAACCAATAACAGTTGCAGCTAATCTAACTTGGACATTATTGAAGAATGTGAGTAATGATGATCAATTTAGTCAAAAGAAGATAAAGTTGAATATGGCTCTTGATGTATTGTATGAGAGTTTTAACCCAACTATTGATGCTTTATCCGGAAGAGAATTGATTAAAGATGTTGTTTTTAGTAGAGGCTCACAACATAAACGCTTGAACTTTCATAGTTTCTATAATGTGATTTTAGAGAAAATGGGTAAAGTCATTTCGGTTGCAACTATAAGGATTTATGGTCAAAAGGTTGCAGAGATAGTTTTTGTAGCTACCAAGGAACAATATCGAAGACAAGGAATGTGTCGTTTGTTGATGCACGAGCTTGAGGAACAGTTGACACGCTTAGGAGTTGGAAGCTTGGTTTTGCATTCCTCCGAGGATGCTATAGACACGTGGACAAAAGCGTTTGGTTTTGCTAGGATAACCGGAGAAGACAAGTGTCAATTTGTTGATAAAACTTTCTTAGAATTTCAGAACACTATCATGTGCCATAAATCCCTGAATAGACCTGTATGGCCTTGTATTGCTTGA 2403 0.3949 MASRSVPPDINIKPEHCPEAVREWYRLTGLQDRKESAGRKNLALKAKQHLLSLGWKFWYIDKNCKWELRYTSPNNGKNHITLRKACESCIEEGGCSPERPSTAAITSISSPPLQLKKRSRESEETEGTTISLSPLQSKKRPRESEETAAISIYSSPLQSKELPRESQEAAATSIYWSPLPSKEKLRESEEEAAATTISLSPLKRPSESEEAAAISISSESDESTSDDDSEASSASSESTSDEDSETSSSGDVNKAIVGTVPTSMENEKHVSKFESELNDSVGSDKRGKVLKTSLMEKNSEDCGRRGKVLKTSIMEKNSEASSKRGKVSKTEGKRERYSLVSWLIKNQVLVSGTNVFCRGRNNVVKRGGLFSDGIVCDCCRVNFNVTGFEAHAGCTRHRPTTSILLGDGRSLLDCQREALSSRDEKRNHCIAEANSEAGNHCVAQLNSDAGNHYVAEGNSDVLVNSEAGNHCVAEGNSEVGNHCVAKANYEANNDTVCSICDLGGDIVLCDQCPSAFHLSCLGLDRVPDGDWFCPTCCCKICYRPKCKQECADGNDSNILVCVQCAQKFHFGCVKALGLGSSHIESNGEKKNWFCSVVCGNMFLCLKKLSGKPITVAANLTWTLLKNVSNDDQFSQKKIKLNMALDVLYESFNPTIDALSGRELIKDVVFSRGSQHKRLNFHSFYNVILEKMGKVISVATIRIYGQKVAEIVFVATKEQYRRQGMCRLLMHELEEQLTRLGVGSLVLHSSEDAIDTWTKAFGFARITGEDKCQFVDKTFLEFQNTIMCHKSLNRPVWPCIA* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3718 800 ProSiteProfiles Zinc finger PHD-type profile. 494 539 IPR019787 -
Mtr3g3718 800 Pfam Acetyltransferase (GNAT) family 669 762 IPR000182 GO:0016407
Mtr3g3718 800 CDD NAT_SF 686 747 - -
Mtr3g3718 800 Pfam Tify domain binding domain 367 418 IPR032308 -
Mtr3g3718 800 MobiDBLite consensus disorder prediction 96 147 - -
Mtr3g3718 800 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 9 794 - -
Mtr3g3718 800 MobiDBLite consensus disorder prediction 181 253 - -
Mtr3g3718 800 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 484 553 IPR013083 -
Mtr3g3718 800 SMART PHD_3 545 598 IPR001965 -
Mtr3g3718 800 SMART PHD_3 496 537 IPR001965 -
Mtr3g3718 800 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 646 780 IPR000182 GO:0016407
Mtr3g3718 800 SUPERFAMILY FYVE/PHD zinc finger 490 544 IPR011011 -
Mtr3g3718 800 MobiDBLite consensus disorder prediction 100 115 - -
Mtr3g3718 800 Pfam PHD-finger 497 538 IPR019787 -
Mtr3g3718 800 PANTHER DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED 9 794 - -
Mtr3g3718 800 MobiDBLite consensus disorder prediction 229 253 - -
Mtr3g3718 800 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 683 769 IPR016181 -
Mtr3g3718 800 Gene3D - 646 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3718 Mtr-Chr3 50975753 50979428 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3718 42 739 PHD Transcription Factor Family AT5G58610 28.631 5.61e-77 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mtr3g3718 Acetyltransf_1 5.4e-10 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3718 - - mtr:MTR_3g103110 1538.86