Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3716 ATGGATGATCTTTTGTGCCATGAAAAAGAAACGTGCTTGGAAGTTGAAGAGAGAGATGAAGAATGGTCAATGAATCAATCACATCAAGAATTTGGTGTATCTGAGGAGGAGCATGTTGGATTATTGCTTCAAAGAGAGATTGCTTTTGGATTCAAAAAAGATGAAAATGTTGTGCTTGAAGACTCCTTCAAACGTGCTCGTTTGAATGCAATCAATTGGATTCTCAAAAAAAGAGAAGCATTGGATTTTCACTTTGAAACAGCTTATTTGTCAGTGACTTACTTGGATCGATTCCTTTCTAAACACTTCATTGATGGTGAGAAGGATTGGGCAATGAGGTTGCTATCAATTGCATGTCTTTCTCTGGCTGCAAAGATGGAGGAGTGTAATGTGCCAGAGCTATCACAGTTTCAATTGGAAGATGATTATGTCTTTGAAGGAAAAGTGATTCAAAAAATGGAGCTTTTTGTACTTAGCTCATTGGATTGGAACATGGGTATCATCACTCCCTTTTCATTCCTTTCTTACTTCATCAAAAAGTTCAGCAATGAATCACCAAGTCCTATTATTTCCAACACAATGCATCCTATTTTCACTGTAGTAATGGAAGAGTTCAATTTAATGGATCACAAGCCATCTGTTGTTGCAGCAGCTGCCACTTTAGTGGCATTCGATCAAAAGTTGACCATAGAAGATGTGAGATTGAAAATGAATTCAATTTCTCAACATCCCTTACTTCAACCGGATGACGTATTTGCTTGCTACAGTCTAATTCAAAGATTGTACGAAGAGAAGATTAAAAGAGAGGAGCATAAGCATTTATGTACACCAAATTCTTCAGTTATTCGATCCAGGCCAATTGACTATGCCGTTGCTATGACGAAGAGAAGAAGACTCTCATTCATTGATGATGAAGATGGTGGTGACAAGAAGGGACCGCATCAAGAAAATCCCAAAATTTGA 963 0.3769 MDDLLCHEKETCLEVEERDEEWSMNQSHQEFGVSEEEHVGLLLQREIAFGFKKDENVVLEDSFKRARLNAINWILKKREALDFHFETAYLSVTYLDRFLSKHFIDGEKDWAMRLLSIACLSLAAKMEECNVPELSQFQLEDDYVFEGKVIQKMELFVLSSLDWNMGIITPFSFLSYFIKKFSNESPSPIISNTMHPIFTVVMEEFNLMDHKPSVVAAAATLVAFDQKLTIEDVRLKMNSISQHPLLQPDDVFACYSLIQRLYEEKIKREEHKHLCTPNSSVIRSRPIDYAVAMTKRRRLSFIDDEDGGDKKGPHQENPKI* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3716 320 ProSitePatterns Cyclins signature. 67 98 IPR006671 -
Mtr3g3716 320 PANTHER CYCLIN-D5-1 34 297 - -
Mtr3g3716 320 PANTHER CYCLINS 34 297 IPR039361 -
Mtr3g3716 320 Gene3D - 167 255 - -
Mtr3g3716 320 SUPERFAMILY Cyclin-like 31 165 IPR036915 -
Mtr3g3716 320 Gene3D - 63 166 - -
Mtr3g3716 320 CDD CYCLIN 67 158 IPR013763 -
Mtr3g3716 320 Pfam Cyclin, N-terminal domain 63 165 IPR006671 -
Mtr3g3716 320 SMART Cyclin_C_2 168 287 IPR004367 -
Mtr3g3716 320 SMART cyclin_7 72 159 IPR013763 -
Mtr3g3716 320 Pfam Cyclin, C-terminal domain 168 268 IPR004367 -
Mtr3g3716 320 SUPERFAMILY Cyclin-like 151 281 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3716 Mtr-Chr3 50947896 50950611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3716 4 241 Core Cell Cycle Gene Families AT4G37630 37.849 2.10e-43 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3716 K18811 - gmx:100780266 365.155