Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3712 ATGGAAACACTTGGAGCTATCCCTGATGATGGTGAATGGGAATGCTTTCGCAGAATATTTGACACCGACAACCACGATGACTCTCCACCGCAATTACTTGATCAAACCTCGCTTCTGCTTGGGGAAAATGATGGGAACTTTGGAGTACAATCCATGTTTTGCTCCCCTTCTGAAGCTGAGGGAAATATTAATACTAATGTGTTTTACTCTTTTGATTCTCACATTAACTATAATTCACAAGAAAGTAATCATAGCACTCAAAGTCACACAAACTACTATTTTGATTGTTCTGATCATGTGGCAGCTAACAATAGTGACAAAACAGAGAATTTTGATCACAGTCAAGTTCAACCTATTGTTTCTTCCACCAAACAGTTGAAGCTCAAAAGGATGCTTGGTGTGCCAGAATTTGATGTGCAAGTAGAAGATAAGACAAACTCATGTGGGAATCCAACTAAGAAACACCGTGCTTCGAAAGATGTGCAAAGATACGTAAATAATGCAGAGTCCAAGAAGAGCAAGAAGGTTAATAGAAATGAGAACAAGGCAGAAGAAGCCAATACAAGTATAGATGGACATAACTCTAGTGGTTATACCTCAGAGGAACAAAACATGTGTGAGGAAAACAGTGGAGGAGCTTCTGCAGCATCTAAATCAACTGTGTCTCTCAACTCCAATGGAAAAAAAAGAGCTAGTAGAGGATCAGCAACAGATCCTCAAAGCCTTTATGCAAGGAAAAGAAGGGAGAAGATAAACGAGAGACTGAGAACTCTGCAGAATCTTGTACCAAATGGAACAAAGGTTGATATAAGCACAATGCTTGAAGATGCAATCCAATATGTGAAATTTCTGCAGCTCCAAATCAAGCTTCTAAGCTCTGATGATCTGTGGATGTATGCTCCAATTGCTTATAATGGACTTGACATTGGATTCAATCTCAACAGGAAGATTTCTCCACCACCATGA 966 0.3944 METLGAIPDDGEWECFRRIFDTDNHDDSPPQLLDQTSLLLGENDGNFGVQSMFCSPSEAEGNINTNVFYSFDSHINYNSQESNHSTQSHTNYYFDCSDHVAANNSDKTENFDHSQVQPIVSSTKQLKLKRMLGVPEFDVQVEDKTNSCGNPTKKHRASKDVQRYVNNAESKKSKKVNRNENKAEEANTSIDGHNSSGYTSEEQNMCEENSGGASAASKSTVSLNSNGKKRASRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIQYVKFLQLQIKLLSSDDLWMYAPIAYNGLDIGFNLNRKISPPP* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3712 321 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 235 284 IPR011598 GO:0046983
Mtr3g3712 321 Pfam Helix-loop-helix DNA-binding domain 245 285 IPR011598 GO:0046983
Mtr3g3712 321 Gene3D - 232 292 IPR036638 GO:0046983
Mtr3g3712 321 MobiDBLite consensus disorder prediction 188 239 - -
Mtr3g3712 321 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 235 300 IPR036638 GO:0046983
Mtr3g3712 321 MobiDBLite consensus disorder prediction 142 247 - -
Mtr3g3712 321 Coils Coil 165 185 - -
Mtr3g3712 321 PANTHER TRANSCRIPTION FACTOR BHLH54 5 315 - -
Mtr3g3712 321 SMART finulus 241 290 IPR011598 GO:0046983
Mtr3g3712 321 MobiDBLite consensus disorder prediction 148 187 - -
Mtr3g3712 321 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 5 315 - -
Mtr3g3712 321 CDD bHLH_AtIND_like 236 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3712 Mtr-Chr3 50910463 50912546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3712 156 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 59.119 2.03e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr3g3712 HLH 1.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3712 - - mtr:MTR_3g103030 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3712 3 50910463 50912546 Mtr3g3712 3 50910463 50912546 ECH