Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr3g3689 | ATGGATGATTTCAGTGATCGGTTTCCCATCGGAATGCGTGTTCTTGCCGTTGACGATGATCCTACTTCTCTCTTGCTTTTGGAAACTCTCCTCCGATCATGTCAATACCACGTAACCACAACTAGTGAAGCAATAACTGCATTGACTATGTTGCAAGAAAACATAGACATGTTTGACCTGGTAATCGCTGAAGTTCACATGCCTGACATGGATGGACTCAAGCTGCTGGAACTTGTAGGACTTGAAATGGATCTTCCTGTCATAATGTTGTCTGCACATGGTGAAACGGAGCTGGTGATGAAGGCAATTTCCCACGGTGCCCGTGATTTTCTGCTGAAACCTGTGAGATTGGAGGAGCTAAGGAACATTTGGCAGCATGTAATTCGGAATAAGGAGTCCCAGTTTGTTTGGTCTGTGGAGCTGCACCGCAAGTTTCTTGAAACTGTTAATCAGTTAGGAGTTGACAAGGCTGTACCCAAAAAGATTTTTGATTTGATGAATGTTGAAAATATTACAAGGGAAGACGTGGCAACCCATCTCCAGAAGTATAGACTCTTTCTGAAAAGAATGGATAGTTCTGGACATTTTCACAATAATACTATCAGATCCTTTTCACCTGCTGGGATAGTTGGTAATCTGAACACTCCAGCTGGTCTGAACGGGCAGTTTGGCCATAACTCCCGATAA | 687 | 0.4338 | MDDFSDRFPIGMRVLAVDDDPTSLLLLETLLRSCQYHVTTTSEAITALTMLQENIDMFDLVIAEVHMPDMDGLKLLELVGLEMDLPVIMLSAHGETELVMKAISHGARDFLLKPVRLEELRNIWQHVIRNKESQFVWSVELHRKFLETVNQLGVDKAVPKKIFDLMNVENITREDVATHLQKYRLFLKRMDSSGHFHNNTIRSFSPAGIVGNLNTPAGLNGQFGHNSR* | 229 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr3g3689 | 228 | Gene3D | - | 133 | 191 | - | - | |
| Mtr3g3689 | 228 | Pfam | Response regulator receiver domain | 14 | 123 | IPR001789 | GO:0000160 | |
| Mtr3g3689 | 228 | ProSiteProfiles | Response regulatory domain profile. | 13 | 128 | IPR001789 | GO:0000160 | |
| Mtr3g3689 | 228 | SMART | REC_2 | 12 | 124 | IPR001789 | GO:0000160 | |
| Mtr3g3689 | 228 | PIRSF | RR_ARR_type-B | 131 | 214 | IPR017053 | GO:0003677|GO:0003700|GO:0009736 | |
| Mtr3g3689 | 228 | PIRSF | RR_ARR_type-B | 1 | 135 | IPR017053 | GO:0003677|GO:0003700|GO:0009736 | |
| Mtr3g3689 | 228 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 131 | 201 | IPR045279 | GO:0009736 | |
| Mtr3g3689 | 228 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 3 | 133 | IPR045279 | GO:0009736 | |
| Mtr3g3689 | 228 | SUPERFAMILY | CheY-like | 11 | 134 | IPR011006 | - | |
| Mtr3g3689 | 228 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR10 | 3 | 133 | - | - | |
| Mtr3g3689 | 228 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR10 | 131 | 201 | - | - | |
| Mtr3g3689 | 228 | SUPERFAMILY | Homeodomain-like | 131 | 189 | IPR009057 | - | |
| Mtr3g3689 | 228 | CDD | REC_typeB_ARR-like | 14 | 128 | - | - | |
| Mtr3g3689 | 228 | Gene3D | - | 10 | 132 | - | - | |
| Mtr3g3689 | 228 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 134 | 186 | IPR006447 | GO:0003677 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr3g3689 | Mtr-Chr3 | 50734968 | 50736659 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr3g3689 | 6 | 225 | Response Regulator Gene Family | AT4G31920 | 49.071 | 1.63e-80 | 249 |
Transcription factors information