Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3686 ATGGTTGAGACTCGCTCTGCAAAGAGGAAAACCAACGAAACCCAAAATCACATGAACAAACGTGTCGTGTTGGGTGAACTTCCCAATTCAACAACCAATCTCACTGTTCCTCAAACTCTGCCAACTGCGTCCGAGAAGACCAATAGCATTGGTGAAGAATCAACTACCCATGAAAAGTTTGATGCTCCTGTTGTTTCCAGTGCTTATAACTATCTTCGATCCATCGAGATGGAGACAAAGAGAAGACCAATGAAGGATTACATGGATATAGTTCAGAGAGACATTGATCCAAAAATGAGAGGAATATTGATTGATTGGTTAGTAGAAGTTGTTGAAGAATACAAGCTTCAAAACGATACACTTCATCGCGCTGTTTCATACATAGATAGGTTCCTATCTTATTACCCTATCTGTAGGGTCAAGCTTCAATTGCTGGGTGTTTCATCCATGTACATTGCATCGAAGTATGAAGATATTAACCCACCCCATGTTGAAGAATTATGCTTTATTACCGATAATACATACAACAGAGATGAGGTTTTAGAGATGGAAACTGACATACTTAAGACCCTAGATAATGATCTGGGCAGTCCCACTGTTAAGACTTTTTTAAGGAGGTTTAATGAAATTGTCTGTAAGAAGAAAAACGCTTCAAATTTGCAGTTTGAATTTCTAAGTAACTATCTTGCTGAGCTAAGTTTATTGGATTATGCTTGTGTGAGGTTCTTGCCTTCTTTGGTTGCTGCGTCGATCACATTGCTTGCTAGATTCATTGTTTGGCCCAAAACTTATCCCTGGCCATCAGCCCTGCAAGAATACTCTGGGTATAAACCAGTTGAGTTGAAAGAATGTGTTCTCATCTTACATGATCTGTATATGTCAAGACGGGAAGGGTCATTTGAAGCTACTCGGGAGAAATACAAGCAGTACAAGTATAAATACGTGGCTAACCTGCCTTCGCCTCCTCATTTACCAAGTTATCTGTTTTAA 990 0.3949 MVETRSAKRKTNETQNHMNKRVVLGELPNSTTNLTVPQTLPTASEKTNSIGEESTTHEKFDAPVVSSAYNYLRSIEMETKRRPMKDYMDIVQRDIDPKMRGILIDWLVEVVEEYKLQNDTLHRAVSYIDRFLSYYPICRVKLQLLGVSSMYIASKYEDINPPHVEELCFITDNTYNRDEVLEMETDILKTLDNDLGSPTVKTFLRRFNEIVCKKKNASNLQFEFLSNYLAELSLLDYACVRFLPSLVAASITLLARFIVWPKTYPWPSALQEYSGYKPVELKECVLILHDLYMSRREGSFEATREKYKQYKYKYVANLPSPPHLPSYLF* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3686 329 SUPERFAMILY Cyclin-like 68 195 IPR036915 -
Mtr3g3686 329 CDD CYCLIN 99 188 IPR013763 -
Mtr3g3686 329 CDD CYCLIN 198 289 IPR013763 -
Mtr3g3686 329 Pfam Cyclin, N-terminal domain 75 195 IPR006671 -
Mtr3g3686 329 Gene3D - 69 317 - -
Mtr3g3686 329 SUPERFAMILY Cyclin-like 198 323 IPR036915 -
Mtr3g3686 329 SMART cyclin_7 202 290 IPR013763 -
Mtr3g3686 329 SMART cyclin_7 105 189 IPR013763 -
Mtr3g3686 329 PANTHER CYCLIN-A3-1-RELATED 60 328 - -
Mtr3g3686 329 ProSitePatterns Cyclins signature. 100 131 IPR006671 -
Mtr3g3686 329 PANTHER CYCLINS 60 328 IPR039361 -
Mtr3g3686 329 SMART Cyclin_C_2 198 321 IPR004367 -
Mtr3g3686 329 Pfam Cyclin, C-terminal domain 198 320 IPR004367 -
Mtr3g3686 329 Gene3D - 83 196 - -
Mtr3g3686 329 PIRSF Cyclin_A_B_D_E 2 327 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3686 Mtr-Chr3 50720327 50722874 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3686 6 329 Core Cell Cycle Gene Families AT1G47230 49.713 3.11e-112 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3686 K06627 - gmx:100776007 400.979