Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3685 ATGAATACTTCCGCTGCAAAGAGGGAAGAAAACGTAATTTACACGTATCTTCGATCAATGGAGTTGGAGGAAAAGAGAAGACCAATGAAGGATTACATGGAGATACTTCAGAGATACATTACTCCAGAATTGAGAGGAAAATTGGTGGATTGGTTAGTAGAAGTTGCTGAAGAATACAAGCTTCATAATGATACACTTCATCTTGCTGTATCATACATAGATATATTCCTATCTTCTCACCCTATCAGAAGGATCAACCTTGAATTGTTGGGTGTTTCATCCTTCTACATTGCATCGAAGTATGAAGATATTACCCCACCCCAAGTGCAAGATTTATGCTTTACTACACGTGATAAATTCAACAAGGAAGAGGTTCAAGAGATGGAAAATAAAATACTCAAGACCCTAGATTTTGATCTGAGCAACCCTACTGTTATGACTTTTCTAAGGCAAGAAAGTGCCAAATCTGATTCATATTTGCAGTTTGAGTTCTTGACTAATTATCTTGCTGAGCTAAGTTTATTGGATTATGATTGTTTGAGCTTCTTGCCTTCTTTGGTGGCGGCGTCTGTTGTATTTCTTGCTAGAATCATTTTTTGGCCTAAATCTCTTCCATGGACAAAAGCCCTGCAAGAATACTCTGAGTATAAACCAGTTGAGTTGAGAGAATGTGTTCTCGTCTTACATGATTTGCATACATCCGAAAAGGGAGCATCCTTTAAAGCTATTCGAACGAAATACAAGCAGCACGAGTTCGAATATGTGGCAGACCTGTCTTCGCCTCCTCGTTTACCAAGTTTTCTGTTTGGAGTGACGGAGTTGGATGTGGTTCCATGA 837 0.3895 MNTSAAKREENVIYTYLRSMELEEKRRPMKDYMEILQRYITPELRGKLVDWLVEVAEEYKLHNDTLHLAVSYIDIFLSSHPIRRINLELLGVSSFYIASKYEDITPPQVQDLCFTTRDKFNKEEVQEMENKILKTLDFDLSNPTVMTFLRQESAKSDSYLQFEFLTNYLAELSLLDYDCLSFLPSLVAASVVFLARIIFWPKSLPWTKALQEYSEYKPVELRECVLVLHDLHTSEKGASFKAIRTKYKQHEFEYVADLSSPPRLPSFLFGVTELDVVP* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3685 278 CDD CYCLIN 143 229 IPR013763 -
Mtr3g3685 278 Pfam Cyclin, C-terminal domain 143 260 IPR004367 -
Mtr3g3685 278 SMART cyclin_7 147 230 IPR013763 -
Mtr3g3685 278 SMART cyclin_7 50 134 IPR013763 -
Mtr3g3685 278 Gene3D - 13 257 - -
Mtr3g3685 278 PANTHER CYCLINS 13 269 IPR039361 -
Mtr3g3685 278 SMART Cyclin_C_2 143 261 IPR004367 -
Mtr3g3685 278 SUPERFAMILY Cyclin-like 143 262 IPR036915 -
Mtr3g3685 278 CDD CYCLIN 44 133 IPR013763 -
Mtr3g3685 278 Pfam Cyclin, N-terminal domain 13 141 IPR006671 -
Mtr3g3685 278 Gene3D - 28 141 - -
Mtr3g3685 278 PANTHER CYCLIN-A3-1-RELATED 13 269 - -
Mtr3g3685 278 PIRSF Cyclin_A_B_D_E 3 267 IPR039361 -
Mtr3g3685 278 SUPERFAMILY Cyclin-like 16 140 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3685 Mtr-Chr3 50713547 50715040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3685 13 269 Core Cell Cycle Gene Families AT1G47230 52.652 2.54e-92 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3685 K06627 - gmx:100776007 307.76