Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3683 ATGGAGACTCGTGCCTCAAAGAAGAGAGCCAACACCATTCAACAACCACCACAAGTCATGGTTCCCAAAAGACAGAGAGTTGTTTTAGGTGAATTTTCCGATCTCAATCTTCCTGATTTTGATTATCAACCTACTCAGAAACTCCAATGTAGGAAAAACCCTAACCTCAAGAATTCAGCCACAACCATTCCTTCCCTTGATTCCAATTTGAATAAGCCGGTTCATACCAAAATCAATGCCAAACGTGACAATCAACATATTATTCAGCCTTATGTATCTGATATCTCTGATTATCTTCGCACAATGGAGATGCAGAAAAAGAGAAGACCAATGGTTGGTTATCTTGAGAATGTTCAGAGAGGCATTTCATCAAACATGAGGGGGACATTGGTTGATTGGTTAGTTGAGGTTGCAGATGAATACAAGCTTCTTCCCGAGACACTTCATCTGTCAGTTTCATACATTGACAGATTCTTATCTATTGAACCTGTCAGCAGATCTAAGCTTCAGTTGCTCGGTGTTTCATCCATGCTCATTGCATCAAAGTATGAAGAAATTACCCCACCAAAGGCAGTGGATTTCTGCCAAATTACTGATAACACCTATGACCTGGAAGAGGTATTAAAAATGGAAGCTGACATACTTAAGTCCCTAAACTTTGAAATGGGCAACCCTAATGTGATAACATTTCTTAAGAGGTTTATTGGGATTGCTTGTGAGAATCGAAAGAATTCCAATTTGCAGTTTGAATTCCTGTGCAGCTATCTTGCTGACTTAAGCTTGTTGGACTATGAGTGTACAAGGTTCTTGCCTTCTGTTGTGGCTGCATCGGTTATATTTCTTGCCAGATTTATTATCCGGCCTGGAGCACATCCTTGGACTCCTTCCCTGTGTGAATGCTTGGGTTACACATCGGCTAATTTAGAAGATTGTGTTATCATTTTACATGATTTGTATATGTCAAGAAAGGCAGGATCCTTCAAAGCTGTTCGTGACAAATACAAGCAGAACAAGTTAAAATGTGTGGCAAACCTGCCTTCATCGCCAGAGATACCAAATCATTACTTTGAAAAAGAGTTATGTAGTACAATTAACTTTGTGAATGAAGTTCATTGCTGA 1119 0.395 METRASKKRANTIQQPPQVMVPKRQRVVLGEFSDLNLPDFDYQPTQKLQCRKNPNLKNSATTIPSLDSNLNKPVHTKINAKRDNQHIIQPYVSDISDYLRTMEMQKKRRPMVGYLENVQRGISSNMRGTLVDWLVEVADEYKLLPETLHLSVSYIDRFLSIEPVSRSKLQLLGVSSMLIASKYEEITPPKAVDFCQITDNTYDLEEVLKMEADILKSLNFEMGNPNVITFLKRFIGIACENRKNSNLQFEFLCSYLADLSLLDYECTRFLPSVVAASVIFLARFIIRPGAHPWTPSLCECLGYTSANLEDCVIILHDLYMSRKAGSFKAVRDKYKQNKLKCVANLPSSPEIPNHYFEKELCSTINFVNEVHC* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3683 372 PIRSF Cyclin_A_B_D_E 2 358 IPR039361 -
Mtr3g3683 372 Gene3D - 108 223 - -
Mtr3g3683 372 PANTHER CYCLINS 19 359 IPR039361 -
Mtr3g3683 372 SUPERFAMILY Cyclin-like 83 222 IPR036915 -
Mtr3g3683 372 SMART Cyclin_C_2 225 348 IPR004367 -
Mtr3g3683 372 SUPERFAMILY Cyclin-like 225 348 IPR036915 -
Mtr3g3683 372 Pfam Cyclin, N-terminal domain 94 222 IPR006671 -
Mtr3g3683 372 SMART cyclin_7 132 216 IPR013763 -
Mtr3g3683 372 SMART cyclin_7 229 317 IPR013763 -
Mtr3g3683 372 ProSitePatterns Cyclins signature. 127 158 IPR006671 -
Mtr3g3683 372 PANTHER CYCLIN-A3-1-RELATED 19 359 - -
Mtr3g3683 372 Pfam Cyclin, C-terminal domain 225 347 IPR004367 -
Mtr3g3683 372 CDD CYCLIN 126 215 IPR013763 -
Mtr3g3683 372 CDD CYCLIN 225 316 IPR013763 -
Mtr3g3683 372 Gene3D - 94 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3683 Mtr-Chr3 50702858 50705750 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3683 3 357 Core Cell Cycle Gene Families AT5G43080 50.423 1.21e-125 363
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3683 3 50702858 50705750 Mtr3g3683 3 50702858 50705750 ECH