Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3682 ATGGAGACTCGCGCATCAAAGAAAAGAGCCAACACCAATCAACAACCTCCACATGTCATCGTTCCCAAAAGACAGAGGGTTGTTTTGGGTGAATTTCCAGATCTCAATCTTCCTGATTTTGATTACCAACCTACTCAGAAACTCCAATGTCCCAAAAATCCCAATCTCAACAAATCAATCTCAACCCTACCTTTCCTTAATTCCAATTTGGATAAGCCTTATGTATCAGACATATTCGATTATCTTCAAACCATGGAGAAAAAGAGAAGACCAATGTTTGGTTATATGGAGAATGTTCAAAGAGGCATTACATCAAACATGAGGGGCACATTGGTTGATTGGTTGGTTGAGGTTGCAGATGAATACACGCTTCTTCCAGAAACCCTTCATCTCTCTGTTTCATACATTGATAGATTCTTATCTAACCAACCTATCATTAGATCTAAGCTTCAGTTGCTTGGTGTTTCATCCATGCTCATTGCATCGAAGTATGAAGAAATCACCCCACCAAAGGCCATAGATTTCTGCCAAATCACTGATAACACATATGATCTTGACGAGGTTTTGAAGATGGAAGCTGACATACTCAAAACCCTGAACTTTGAAATGGGCAACCCTAATGTCATCACATTTCTAAAGAGTTTTGTTGGGATTGCTTCTGAGAATCAAAAGACTTCCAATTTGCAGTTTGAATATCTGTGCAATTATCTTGCCGATATAAGCCTGCTGGACTATGAATGTATAAGATTCATGCCTTCAATTGTGGCTGCTTCTGTTATCTTTCTTGCTAGATTTATTCTCCGGCCTGGAGTACATCCTTGGACTTCATCCCTATGTGAATGTCTGGGTTACAAGTCGGCTGAATTGGAAGAATGTGTTATGATTTTACATGACTTGTATTTGTCAAGAAGGGCAGCATCCTTCAAAGCTGTTAGGGAGAAATACAAGCAACAAAAGTTCAAATATGTGGCAAACCTCCCTAGCTCGCCAGAGATACCAAATTATTACTTTGAAGAAGACTGA 1023 0.3939 METRASKKRANTNQQPPHVIVPKRQRVVLGEFPDLNLPDFDYQPTQKLQCPKNPNLNKSISTLPFLNSNLDKPYVSDIFDYLQTMEKKRRPMFGYMENVQRGITSNMRGTLVDWLVEVADEYTLLPETLHLSVSYIDRFLSNQPIIRSKLQLLGVSSMLIASKYEEITPPKAIDFCQITDNTYDLDEVLKMEADILKTLNFEMGNPNVITFLKSFVGIASENQKTSNLQFEYLCNYLADISLLDYECIRFMPSIVAASVIFLARFILRPGVHPWTSSLCECLGYKSAELEECVMILHDLYLSRRAASFKAVREKYKQQKFKYVANLPSSPEIPNYYFEED* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3682 340 CDD CYCLIN 107 196 IPR013763 -
Mtr3g3682 340 Pfam Cyclin, C-terminal domain 206 328 IPR004367 -
Mtr3g3682 340 SMART cyclin_7 113 197 IPR013763 -
Mtr3g3682 340 SMART cyclin_7 213 298 IPR013763 -
Mtr3g3682 340 Gene3D - 91 204 - -
Mtr3g3682 340 CDD CYCLIN 206 297 IPR013763 -
Mtr3g3682 340 Gene3D - 77 325 - -
Mtr3g3682 340 PANTHER CYCLIN-A3-1-RELATED 70 339 - -
Mtr3g3682 340 PANTHER CYCLINS 70 339 IPR039361 -
Mtr3g3682 340 SUPERFAMILY Cyclin-like 206 328 IPR036915 -
Mtr3g3682 340 Pfam Cyclin, N-terminal domain 77 203 IPR006671 -
Mtr3g3682 340 SMART Cyclin_C_2 206 329 IPR004367 -
Mtr3g3682 340 ProSitePatterns Cyclins signature. 108 139 IPR006671 -
Mtr3g3682 340 SUPERFAMILY Cyclin-like 72 203 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3682 Mtr-Chr3 50696730 50698844 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3682 3 339 Core Cell Cycle Gene Families AT5G43080 51.156 1.58e-121 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3682 K06627 - gmx:100786875 435.261