Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3678 ATGCATTTGACCCTTCTCAGTTTGCTTTTATTTCTCAAACTTTCATCTTATTCAGCATTTGATACTATGAATCAAGGTTCATCCCTCTCAGTGGAAGAACAAAAAGATATCATAGTATCACAAAATGGCATGTTCAGTGCTGGCTTCTATGCTGTTGGTGAAAATGCCTATTCCTTTGCCATTTGGTTTTCTGAACCAAATCATCAAACCACAAACCTTACCATAGTATGGATAGCAAACCGTGGCCAACCAGTCAATGGAAAAGGCTCAAAACTTTTCCTTCTCAAACATGGTAACCTTGTCTTAAGAGATGCCGATGAGTCTCACGTTTGGTCCACAAACACTGCCTCACTTTCCTCTGTTGATCTCCAACTTTTAAACACCGGTAACCTTGTTTTACACGGTGACGGTTTCACTTTGTGGCAAAGCTTTGATTTTCCTACTGATACACTTCTACCAAACCAAGTTTTCAACAGACATTCAAAACTAGTTTGTTCAATAAGCGAAACAAACAAGTCATCTGGTTTTTATACGTTGTATTTCGACAACGACAATATTCTTCGTCTTCTTTACGACGGTCCTGAAGTATCAAGTATTTATTGGCCAGATCCTTGGCTAACTGATTGGGATGCTAAAAGGGCTGGTTACAATAACAGCAAAGTCGCGGTTTTGAATACTATTGGTAACTTTAGTTCATCAGATGATTTCAATTTCATGACTTCTGATTATGGAGATGCGCTGATGCAGAGAAGACTAAGACTTGATCCTGATGGAAACATTCGCACTTATAGTCGAAAACATGGAGGACAAAAATGGTACATATCGTGGCAAGCCAAATCAAGACCTTGTAGAATTCATGGTGTTTGTGGCATAAATAGTTTGTGTTCTTATTATAGTAACAGTGTGAAATGTTCTTGTCTTCCAGGCTATAAAATGAAGAATCATCAAAGTTGGGCTTATGGATGTGAACCAGAATTCTCTCTTTCATGCAACAGAACCGAAACTCGGTTTCTAGTTGTATCGAATGTGGAGTTATTTGGTTATGATTATAGTATCGTGATAAATTACACACTTGAACAATGCAAAGAGTTATGCTTGCAATTATGTAACTGCAAAGGTATCCAATATACCTATGTCAAAGCCGGCAGTGGTATACCTGGTACTTATACATGTTACCCAAAAATGCAGTTGCGAAACGCATATCGAATACCTTATTTCAACGCTGATTTGCACATAAAATTGCCAGCAAACAGTTCATACACTTACAGGGAATCAATGGATGACAAGTACAAGCTTGCTTGTTTGGCGAATCCGAAAACAACAACTCTTGAAACATCATACAACAAAGTTCATGAAGGAAGGTATATTATTCGGTTTTTGCTCTGGTTTGTAGGGGGAATGGGAGTATTAGAAATCTTGTGCTTATTTCTTTTGTGGTTTTTCTTTGTAAGAAAAAAACAACAAAGTTCAGATACAAGAGTGTATAATAATTTGTGCTTAATTGGTTTTAGAAAATTCAGTTATTCTGAATTGAAAAAAGCTACCAAAAGTTTTAGTCAAGAGATTGGAAAAGGCGCAGGAGGAATTGTTTACAAAGGTGTATTGTTGGATCAACGAGTTGTCGCGGTGAAGAGACTCAAGGAAGCAAATCAAGGCGAAGAAGAGTTTCTCGCAGAAGTAAGCAGCATTGGAAAGCTTAACCACATGAATTTGATTGAAATGTGGGGTTATTGTGCAGAGGGAAAACATAGAATGCTTGTGTATGAGTTCATGGATAATGGTTCTTTAGCAGAACATATAAAGTCTAATAAATTGGATTGGGGAAAAAGATTTGACATAGCTTTAGGCACTGCAAAAGGTTTGGCTTATATCCATGAAGAGTGTTTGGAGTGGATTTTGCATTGTGATGTGAAGCCACAAAACATTCTTTTGGATTCTAATTATCAACCAAAGATTTCAGATTTTGGTTTGTCGAAATTGAGAAACAGGAAGGATTCTAAATTCTCTAGTTTTTCGAAGATACGAGGAACAAGAGGTTACATGGCACCTGAGTGGATTTTGAATCATTCAATAACATCTAAAGTTGATGTTTATAGCTATGGAATGGTTGTGTTGGAAATGATAACTGGAAGAAGTGCAACAAAGGATGTTGATATGGGTAATGATAAACTAGGTTTGGTTATATGGTTGAGAGAGAAAAGATACAAAAGAATTTCATGGATTAATGAAATTATGGACCCCACCTTAGATGGAGGCTGTGATGAAAGTGAAGTTGAAGCTTTGGCTGAAGTGGCTATGCAATGTGTAGAGGAAGAGAAGGACAAGAGACCTACAATGAGTCATGTGGTAGAAGTGCTTCAGAAAATTTGCCGTGAAAATGATGATCAAGAATCAGCACGTAGCTAG 2406 0.3728 MHLTLLSLLLFLKLSSYSAFDTMNQGSSLSVEEQKDIIVSQNGMFSAGFYAVGENAYSFAIWFSEPNHQTTNLTIVWIANRGQPVNGKGSKLFLLKHGNLVLRDADESHVWSTNTASLSSVDLQLLNTGNLVLHGDGFTLWQSFDFPTDTLLPNQVFNRHSKLVCSISETNKSSGFYTLYFDNDNILRLLYDGPEVSSIYWPDPWLTDWDAKRAGYNNSKVAVLNTIGNFSSSDDFNFMTSDYGDALMQRRLRLDPDGNIRTYSRKHGGQKWYISWQAKSRPCRIHGVCGINSLCSYYSNSVKCSCLPGYKMKNHQSWAYGCEPEFSLSCNRTETRFLVVSNVELFGYDYSIVINYTLEQCKELCLQLCNCKGIQYTYVKAGSGIPGTYTCYPKMQLRNAYRIPYFNADLHIKLPANSSYTYRESMDDKYKLACLANPKTTTLETSYNKVHEGRYIIRFLLWFVGGMGVLEILCLFLLWFFFVRKKQQSSDTRVYNNLCLIGFRKFSYSELKKATKSFSQEIGKGAGGIVYKGVLLDQRVVAVKRLKEANQGEEEFLAEVSSIGKLNHMNLIEMWGYCAEGKHRMLVYEFMDNGSLAEHIKSNKLDWGKRFDIALGTAKGLAYIHEECLEWILHCDVKPQNILLDSNYQPKISDFGLSKLRNRKDSKFSSFSKIRGTRGYMAPEWILNHSITSKVDVYSYGMVVLEMITGRSATKDVDMGNDKLGLVIWLREKRYKRISWINEIMDPTLDGGCDESEVEALAEVAMQCVEEEKDKRPTMSHVVEVLQKICRENDDQESARS* 802
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3678 801 SMART ntp_6 332 414 IPR003609 -
Mtr3g3678 801 Gene3D Phosphorylase Kinase; domain 1 481 590 - -
Mtr3g3678 801 Pfam S-locus glycoprotein domain 228 313 IPR000858 GO:0048544
Mtr3g3678 801 Gene3D - 16 145 IPR036426 -
Mtr3g3678 801 ProSitePatterns Protein kinases ATP-binding region signature. 522 544 IPR017441 GO:0005524
Mtr3g3678 801 Gene3D Transferase(Phosphotransferase) domain 1 591 801 - -
Mtr3g3678 801 CDD PAN_AP_plant 326 415 - -
Mtr3g3678 801 Pfam D-mannose binding lectin 74 160 IPR001480 -
Mtr3g3678 801 CDD B_lectin 38 147 IPR001480 -
Mtr3g3678 801 Gene3D - 146 272 IPR036426 -
Mtr3g3678 801 SUPERFAMILY Protein kinase-like (PK-like) 495 786 IPR011009 -
Mtr3g3678 801 SMART blect_4 26 147 IPR001480 -
Mtr3g3678 801 PIRSF SRK 1 800 IPR024171 GO:0004674
Mtr3g3678 801 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 4 789 - -
Mtr3g3678 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Mtr3g3678 801 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 201 IPR036426 -
Mtr3g3678 801 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 4 789 - -
Mtr3g3678 801 ProSiteProfiles PAN/Apple domain profile. 330 419 IPR003609 -
Mtr3g3678 801 ProSiteProfiles Bulb-type lectin domain profile. 14 146 IPR001480 -
Mtr3g3678 801 CDD STKc_IRAK 522 789 - -
Mtr3g3678 801 Pfam Protein kinase domain 519 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3678 801 ProSiteProfiles Protein kinase domain profile. 516 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3678 801 SMART serkin_6 516 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr3g3678 Mtr-Chr3 50664098 50666747 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3678 487 791 Receptor kinase-like Gene Family AT3G58690 40.190 4.59e-67 226
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr3g3678 Pkinase 2e-53 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3678 - - gmx:100792388 1107.05
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3678 3 50664098 50666747 Mtr3g3678 3 50664098 50666747 ECH