Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3675 ATGCAAATCCAAGTCTTCTTCCTCCTCTTTCTCTTGTTCACCAAAACAACTTCATCACAATCAACAACAAACATCCTCCCACAAGGCTCATCTCTTTCAGTTGAAAAATCAAATAACACCCTCATTTCATCCAACGGCGATTTCTCCGCCGGTTTCCTCCCCGTCGGAGATAACGCCTTTTGTTTCGCCGTCTACTTCACAAAATCCAAACAACCCACCATTGTTTGGATGGCTAACAGAGACCAACCTGTTAACGGCAAACACTCAAAACTCTCACTTTTCAAAAACGGTAATCTCATTTTAACCGATGCAGACAGAAAAAGAACACCAATTTGGTCCACTTCATCCTTTTCTCCTTTTCCATTACAGCTCAAGCTTCAAAACAATGGCAACCTCGTTCTCTCCACGACCAACGGTAACATTAGTATCCTTTGGCAAAGCTTTGATTTTCCAACAGATACTCTTCTTCCTGGCCAAGAAATTAATGAGCGAGCAACCTTAGTTTCATCCAAAAGTGAAACAAACTATTCCTCAGGTTTCTATAAGTTTTATTTCGACAACGACAATGCTCTTCGTCTTCTATTCAAAAGTCCTTTGTTATCTAGTGTCTATTGGCCATCACCTTGGGTATTACCTGTTGATGCAGGAAGATCAACTTATAATGTTACTAAAATCGCGCTACTCGATTCCTTTGGCCATTTCATGTCCTCTGATGCATACCAATTTGTCACCATTGATTATCCAAAGAAACTTCATAGATTACTCAAAATGGATCATGATGGTAACCCACGTGTTTATAGCTTCAATGATAAAACTAAGACATGGGAAGTTTCATGGCAAGCTATTGCTGAACCATGTGAGGTTCATGGTATTTGTGGAGAAAATAGCATGTGTAGTTATGATCCTGTTAATGGAAGAACATGTTATTGTTTGAAAGGTTACAAGTTGAAGAATCGTAATGATTGGACACAAGGGTGTGAGCCTGAGTTTAAACCTGCTGATCTTTCTTGCGACAGTGCTCGCGTTGAGGATTTCGGTTTTCTTCATCTTCAAAACATGGAGTTGTATGGCTATGATTTGTATGTAGCAAAAGTGACAAGCTTGAAGCAATGTCAAAAGTTGTGTTTGGATCTTTGTGAAAAATGCAAAGCTGTTCAATTCAAATTCAATGGTGTTGCTACATATGATTGTTTTCCTAAGACGTTGTTGGCCAATGGAAGAGATTCTCACAATATTGATGGAGATATTTACTTGAAATTGCCCAAAAATACTTTGTTATCTTCCACCATTCCTTTTAAACATTCACCTTTGAACTGTTCCATTGCTTTGTTTCAACCCTTGAATAGATTCTACGAAAAACCAAGTAAAAACTCCATATTAAGTTTCTTGACTTGGTTAGCATTAGGTATAGGGGTGTTTGAGTTTTCCATAATTTTATTTGTATGGTTCTTTTTGTTTAGAACCAATAAGAACCATGATGATGTTGATCAAGTACAAAGACACCTTCTTTCAGCAACAGGATTTCAAAGATTTTCGTATTCAGAGCTCAAAACCGCGACAAGAGGGTTTAGCAAAGAGATCGGTCGAGGAGGAGGAGGGATTGTTTACAAAGGTACACTCGATGATGATCGTGTTGCTGCTGTTAAATGCTTAAATGAAGCTCATCAGGGAGAAGCTGAATTTCTAGCTGAAATAAGCACAATTGGTATGTTGAACCATATGAATTTAATTGATATGTGGGGATATTGTGTTGAAGGGAAACATAGGCTTTTGGTCTATGAGTATATAGAACATGGTTCTTTAGCGGAGAATCTATGTTCTAATTCACTTGATTGGAATAAGAGGTTTAATGTAGCTGTTGGAACAGCTAAAGGTTTGGCTTATTTACATGAAGAGTGTTTGGAATGGGTTTTACATTGTGATGTGAAACCTCAAAATATTTTACTTGACACAAATTTTCAACCAAAGGTTGCTGATTTTGGTTTATCAAAACTATTGAATAGAGATGAACGTGATAGTTCTGCTTTTTCAAGAATAAGAGGGACAAGAGGTTATATGGCACCTGAATGGGTTTATAATCTTCGTATTACTTCAAAAGTTGATGTTTATAGTTATGGGATTGTTTTGCTTGAAATGGTGAGTGGAAAAAGTCCAATGGAAATTCATAGTGTTGTTGATAATAGTGGAGGTTTGGAGCATCATCATCGAATGGTGAGTTGGGTGATGGAAAAGGTGAAAAGTGCACCTACGACTATGTTTTGGATTGAAGAGATTGTTGATGGTAATTTGGAAGGAAAATATGATGTTAATCAGGTTGAGAATTTGGTTAAAGTGGCTTTGATGTGTGTGAAAGATGACATGAATGAAAGACCATCCATGAGTCAAGTAGTGGAGATGCTTCTTCAGTCCCATGAAAAAAGAGGCACCCCTCGTTAG 2436 0.3764 MQIQVFFLLFLLFTKTTSSQSTTNILPQGSSLSVEKSNNTLISSNGDFSAGFLPVGDNAFCFAVYFTKSKQPTIVWMANRDQPVNGKHSKLSLFKNGNLILTDADRKRTPIWSTSSFSPFPLQLKLQNNGNLVLSTTNGNISILWQSFDFPTDTLLPGQEINERATLVSSKSETNYSSGFYKFYFDNDNALRLLFKSPLLSSVYWPSPWVLPVDAGRSTYNVTKIALLDSFGHFMSSDAYQFVTIDYPKKLHRLLKMDHDGNPRVYSFNDKTKTWEVSWQAIAEPCEVHGICGENSMCSYDPVNGRTCYCLKGYKLKNRNDWTQGCEPEFKPADLSCDSARVEDFGFLHLQNMELYGYDLYVAKVTSLKQCQKLCLDLCEKCKAVQFKFNGVATYDCFPKTLLANGRDSHNIDGDIYLKLPKNTLLSSTIPFKHSPLNCSIALFQPLNRFYEKPSKNSILSFLTWLALGIGVFEFSIILFVWFFLFRTNKNHDDVDQVQRHLLSATGFQRFSYSELKTATRGFSKEIGRGGGGIVYKGTLDDDRVAAVKCLNEAHQGEAEFLAEISTIGMLNHMNLIDMWGYCVEGKHRLLVYEYIEHGSLAENLCSNSLDWNKRFNVAVGTAKGLAYLHEECLEWVLHCDVKPQNILLDTNFQPKVADFGLSKLLNRDERDSSAFSRIRGTRGYMAPEWVYNLRITSKVDVYSYGIVLLEMVSGKSPMEIHSVVDNSGGLEHHHRMVSWVMEKVKSAPTTMFWIEEIVDGNLEGKYDVNQVENLVKVALMCVKDDMNERPSMSQVVEMLLQSHEKRGTPR* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3675 811 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Mtr3g3675 811 Pfam D-mannose binding lectin 73 164 IPR001480 -
Mtr3g3675 811 Gene3D Transferase(Phosphotransferase) domain 1 596 809 - -
Mtr3g3675 811 ProSiteProfiles Protein kinase domain profile. 521 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3675 811 SMART blect_4 32 151 IPR001480 -
Mtr3g3675 811 Pfam S-locus glycoprotein domain 247 317 IPR000858 GO:0048544
Mtr3g3675 811 Pfam Protein kinase domain 524 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3675 811 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Mtr3g3675 811 CDD B_lectin 36 151 IPR001480 -
Mtr3g3675 811 SMART ntp_6 342 420 IPR003609 -
Mtr3g3675 811 PANTHER RECEPTOR PROTEIN KINASE ZMPK1-RELATED 1 805 - -
Mtr3g3675 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Mtr3g3675 811 PANTHER OS07G0415500 PROTEIN 1 805 - -
Mtr3g3675 811 SUPERFAMILY Protein kinase-like (PK-like) 500 800 IPR011009 -
Mtr3g3675 811 PIRSF SRK 1 811 IPR024171 GO:0004674
Mtr3g3675 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 208 IPR036426 -
Mtr3g3675 811 Gene3D - 18 149 IPR036426 -
Mtr3g3675 811 SMART serkin_6 521 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3675 811 CDD PAN_AP_plant 334 421 - -
Mtr3g3675 811 ProSiteProfiles PAN/Apple domain profile. 337 421 IPR003609 -
Mtr3g3675 811 CDD STKc_IRAK 527 800 - -
Mtr3g3675 811 Gene3D Phosphorylase Kinase; domain 1 486 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3675 Mtr-Chr3 50644187 50646898 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3675 459 800 Receptor kinase-like Gene Family AT5G45780 38.920 4.45e-68 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr3g3675 Pkinase 7.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3675 - - gmx:100816469 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3675 3 50644187 50646898 Mtr3g3675 3 50644187 50646898 ECH