Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3672 ATGGCTCAACAACACTATAACCCAATATTACTTTTGGATACGTTGTACTGTTCAGAAGAACATTGGGAGGAACAAGATGAGTTAGAGTACGATAATGTTTCCTTAAACAACACAACAATAAACACCACTACTTGTTCTTTGTTAGAAACCGACATGTTTTGGGAGGATGAAGAACTAAAATCACTTCTCAACAAAGAACAACAAAACCCACTTTACATCTTTCTTCAAACCAACCCTGTTTTGGAAACTGCTCGAAGAGAATCTATTGAATGGATTCTCAAAGTGAATGCTCATTACTCTTTCTCAGCTCTTACTTCCGTTCTTGCTGTCAACTACCTTGATAGGTTTCTATTCAGCTTTCGTTTTCAGAATGAGAAGCCATGGATGACTCAGCTTGCAGCTGTTGCTTGTCTTTCTCTTGCTGCTAAAATGGAAGAGACCCATGTTCCTCTTTTGCTAGATCTTCAAGTTGAAGAGAGTAGATACTTGTTTGAAGCAAAAACGATTAAAAAGATGGAAATTTTGATACTTTCAACTCTTGGATGGAAGATGAATCCAGCAACACCTCTTTCTTTTATTGATTTTATCATAAGAAGACTTGGATTGAAAGACCATCTAATTTGTTGGGAGTTTCTTAAGAGATGTGAAGGTGTTCTTCTCTCTGTCATTAGATCAGATTCTAAGTTTATGAGTTATCTACCTTCTGTTTTGGCAACTGCTACAATGGTTCATGTTTTCAACAGCGTTGAGCCTAGTTTAGGAGATGAATATCAAACCCAGCTTCTTGGTATTCTTGGAATCAACAAAGACAAGGTGGATGAATGTGGGAAGCTATTGTTGAAACTGTGGTCAGGGTATGAAGAGGGGAATGAATGCAACAAACGCAAGTTTGGGTCAATTCCAAGTAGTCCAAAAGGTGTAATGGAAATGTCGTTTAGCTGTGATAATTCCAATGATTCATGGGCTATTATAGCAGCTTCAGTATCATCTTCACCAGAGCCTTTGTCCAAGAAGATCAGAACACAAGACCAGTTTCTATTAAATTAA 1047 0.3754 MAQQHYNPILLLDTLYCSEEHWEEQDELEYDNVSLNNTTINTTTCSLLETDMFWEDEELKSLLNKEQQNPLYIFLQTNPVLETARRESIEWILKVNAHYSFSALTSVLAVNYLDRFLFSFRFQNEKPWMTQLAAVACLSLAAKMEETHVPLLLDLQVEESRYLFEAKTIKKMEILILSTLGWKMNPATPLSFIDFIIRRLGLKDHLICWEFLKRCEGVLLSVIRSDSKFMSYLPSVLATATMVHVFNSVEPSLGDEYQTQLLGILGINKDKVDECGKLLLKLWSGYEEGNECNKRKFGSIPSSPKGVMEMSFSCDNSNDSWAIIAASVSSSPEPLSKKIRTQDQFLLN* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3672 348 SMART cyclin_7 90 178 IPR013763 -
Mtr3g3672 348 Pfam Cyclin, N-terminal domain 65 185 IPR006671 -
Mtr3g3672 348 PANTHER CYCLINS 32 340 IPR039361 -
Mtr3g3672 348 Gene3D - 69 185 - -
Mtr3g3672 348 PANTHER CYCLIN D3.1 PROTEIN 32 340 - -
Mtr3g3672 348 Pfam Cyclin, C-terminal domain 188 314 IPR004367 -
Mtr3g3672 348 CDD CYCLIN 85 177 IPR013763 -
Mtr3g3672 348 Gene3D - 62 276 - -
Mtr3g3672 348 SUPERFAMILY Cyclin-like 169 291 IPR036915 -
Mtr3g3672 348 SUPERFAMILY Cyclin-like 53 185 IPR036915 -
Mtr3g3672 348 SMART Cyclin_C_2 187 315 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3672 Mtr-Chr3 50603150 50604925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3672 10 282 Core Cell Cycle Gene Families AT4G34160 53.114 4.58e-93 281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3672 3 50603150 50604925 Mtr4g3394 4 47285438 47287473 ECH
Mtr3g3672 3 50603150 50604925 Mtr1g4099 1 52534539 52536835 ECH
Mtr3g3672 3 50603150 50604925 Mtr3g3672 3 50603150 50604925 ECH