Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3665 ATGAACAAAAAACATTCTCATCACTCATCTCACCTCTATTCAACAATGGCACCCAAAACAAACCACTCAAACACTTTCATCATCTTCTTACTACTCACAACTACTACATTCTCCAACTCAACCAAACTCAACAACAAAACCAAACCCTCTCTCTCAGATCCTACATCTCTTTTAGCATTCAAATCAAAAGCTGACCTAAACAACCACCTCAACTTCACAACCAAAACCCCATTCTGCAACTGGCAAGGCGTAGAATGCAACAACGAACACAAAGTCATTCGTCTCATTCTCCGCAACTTAGATCTCGGTGGTTTTTTTCCTTCTCGGACACTCTCCAATCTCGACCAACTCCGTGTACTCAGTTTACAGAATAACTCCCTCACCGGAACCATACCCAATCTCTCCGGTCTTTTCAACCTCAAATCACTCTTTCTCGATAATAACTACTTCACTGGTTCAATCCCATTTTCTATATTCTCTCTTCACAGACTTAAAACTTTGGATTTCTCTCATAACAATCTCTCTGGAAATATTCCTACGCATTTCATTAACGTTGATCGTCTTTACTATCTTCGTTTAAGCTTCAACTCTTTCAACGGTACTATTCCTCCGTTTAATCAATCTTCTCTCAAAACTTTTGATGTTTCCGGTAACAATCTCTCCGGTGCAGTTCCGTTAACCACTGCGTTGTCTCGTTTTCAGCCTTCTTCTTTTGCTTTAAACCCTAACCTCTGTGGAGAGATTATTCGGAGAGAATGTCGTCCATCAACGCCGTTTTTTTCTCCGGCTACTCCTCCGACGGTTGGACTTAACCAGAGTGCGAAGGTTCATGGATTAATCCGGCAGCCGTATGGAAAGAAACATGATCGGAGAGCGGTGATAATCGGATTTTCAACTGGAATCGTTTTTCTGTTACTTTCTCTAGCGTGTTTCGCGGTGGTGATAAAGAAACAGAGAAAGAAAAAGGGAAAAGGAACTTCTGGATCGAGTGTGATGGCTTCTGACACGGCGGCGGCGACGGTGGAGGAAGCGGTGGTGATGCAAATGGAGCAAGAGAGAGAGTTAGAACAAAAAGTAAAAAGAGCGCAAGTTGCAAAGAGTGGGAGTTTAATATTCTGTGCGGGTGAGTCTCAGGTGTATACGCTGGACCAGTTGATGAAAGGTTCTGCGGAGCTATTAGGAAGAGGGTGTTTAGGAACAACTTATAAAGCGGTGCTTGATAACCGTTTGATTGTAACAGTGAAGCGTCTTGATTGTGCGAAAATGGGTGGGTATGTTAGTAAGGATGTTTTTGAGCGTCACATGGAATCAGTTGGTGGTCTTCGTCATCCGAATTTGGTTGCTGTTAGGGCTTATTTTCAGGCTAATCAAGAGAGGCTTATTATCTATGATTATCAGCCTAATGGAAGTCTCTTCTCCCTCATTCACGGTTCCAGATCAAGCAGGGCAAGGCCATTACACTGGACCTCATGCTTGAAAATAGCAGAGGACTTAGCACAAGGGCTTTCCTACATCCACCAGGCATGGAGACTGGTCCATGGAAATCTCAAGTCGACCAATGTTCTCCTAGGACCTGATTTCGAAGCTTGCGTCACAGACTACTGCCTGTCTGTGTTGACCAACCCATCTACCTTTGACGAGGTTGGTGATTCTGCACCTTATAGAGCCCCGGAGACCCGCAATCCAAATCATCAGCCAACCCCCAAATCTGACGTTTATGCATATGGTATTTTGTTACTAGAGCTTTTAACTGGGAAATATGCTTCTGAGCTTCCATTCATGGTTCCTGGTGATATGTCAAAATGGGTGAGATCTATCAGGGATGACAATGGGAGCGAAGATAACAGAATGGATATGCTTCTTCAGGTGGCTACAACTTGTAGCTTGATCTCTCCAGAGCAGAGGCCCACAATGTGGCAGGTCTTGAAGATGTTACAAGAAATCAAAGAGATTGTACTCTTGGAGGATAGTGAGCTGGACCTACGTAGTAGCAATGCCATTGCCATGTCTTAG 2013 0.4382 MNKKHSHHSSHLYSTMAPKTNHSNTFIIFLLLTTTTFSNSTKLNNKTKPSLSDPTSLLAFKSKADLNNHLNFTTKTPFCNWQGVECNNEHKVIRLILRNLDLGGFFPSRTLSNLDQLRVLSLQNNSLTGTIPNLSGLFNLKSLFLDNNYFTGSIPFSIFSLHRLKTLDFSHNNLSGNIPTHFINVDRLYYLRLSFNSFNGTIPPFNQSSLKTFDVSGNNLSGAVPLTTALSRFQPSSFALNPNLCGEIIRRECRPSTPFFSPATPPTVGLNQSAKVHGLIRQPYGKKHDRRAVIIGFSTGIVFLLLSLACFAVVIKKQRKKKGKGTSGSSVMASDTAAATVEEAVVMQMEQERELEQKVKRAQVAKSGSLIFCAGESQVYTLDQLMKGSAELLGRGCLGTTYKAVLDNRLIVTVKRLDCAKMGGYVSKDVFERHMESVGGLRHPNLVAVRAYFQANQERLIIYDYQPNGSLFSLIHGSRSSRARPLHWTSCLKIAEDLAQGLSYIHQAWRLVHGNLKSTNVLLGPDFEACVTDYCLSVLTNPSTFDEVGDSAPYRAPETRNPNHQPTPKSDVYAYGILLLELLTGKYASELPFMVPGDMSKWVRSIRDDNGSEDNRMDMLLQVATTCSLISPEQRPTMWQVLKMLQEIKEIVLLEDSELDLRSSNAIAMS* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3665 670 Gene3D Phosphorylase Kinase; domain 1 352 465 - -
Mtr3g3665 670 ProSiteProfiles Leucine-rich repeat profile. 116 138 IPR001611 GO:0005515
Mtr3g3665 670 ProSiteProfiles Protein kinase domain profile. 387 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3665 670 SUPERFAMILY Protein kinase-like (PK-like) 391 646 IPR011009 -
Mtr3g3665 670 Gene3D Ribonuclease Inhibitor 207 252 IPR032675 -
Mtr3g3665 670 Gene3D Ribonuclease Inhibitor 46 206 IPR032675 -
Mtr3g3665 670 SUPERFAMILY L domain-like 66 245 - -
Mtr3g3665 670 Gene3D Transferase(Phosphotransferase) domain 1 467 661 - -
Mtr3g3665 670 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 25 657 - -
Mtr3g3665 670 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 25 657 - -
Mtr3g3665 670 Pfam Leucine rich repeat 139 197 IPR001611 GO:0005515
Mtr3g3665 670 Pfam Protein kinase domain 391 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3665 Mtr-Chr3 50543146 50547069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3665 26 666 Receptor kinase-like Gene Family AT5G43020 55.807 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr3g3665 Pkinase 2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3665 - - cam:101511242 1084.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3665 3 50543146 50547069 Mtr3g3665 3 50543146 50547069 ECH