Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3659 ATGAACACTCCTTCTCTAAACCTTGTTTCTGAATGTTTTATCAAACCATGTCCCCCAATCGAAGACTCAAACCAAATATGCTATTTAGGACCTTGGGATATTAGCATGTTATCTGCATACTATATTCAAAAGGGTCTTCTCTTCAAAAAACCAACATCATCATCACTAAACAAACAACATTTCATAGAGAACTTGGTAGAGAAACTGAAACACTCCCTTTCCCTCACACTTTTCCATTTCCATCCCCTCTCAGGCCGTCTTGTTACTAAAAAATCTGAAGACCCTCATTTTTACACTGTTTTTGTTGATTGCAAAAACAGTCTCGGAGCTAAATTTATTCATGCAACTTTAGATATCACCATCAATGATATTCTCTCACCTGTTGATGTGCCACCTATTGTTCATTCATTCTTTGACCACCACAGAGCAGTCAACCATGATGGACACACCATGTCTTTGTTGTCCATTCAAGTTACTGAATTATTGGATAGTGTTTTTATAGGTTGTTCCATGAATCATTGTATTGGTGATGGAACTGGTTATTGGAATTTCTTTAACTCATTTTCTGAGATATTTCAAAATGATGTTCATGTTCCTGTTCCGATTTCACATAAACCTATTCACAATAGATGGTTTCCAGAAGGTTATGGTCCAATCATCAGCCTTCCTTTCAAACATCATGACGAGTTTATTCATAGATATGAAACACCTATTTTGAGAGAGAGAATATTTCATTTTTCAGCAGAGTCTATTGCGAAACTTAAAGCAAAAGCTAACAAAGAGTCTGATACAAACAAAATCTCTTCTTTTCAATCCTTATCAGCACTAGTTTGGAGATCTCTAACGCGTGCACGTCAGTTACAACAAGGTCAACGAACAACTTGCAAATTGGCCGTAAACAACCGAACGAGAATGGAACCACCTCTTCCTAAGGAATATTTTGGGAATTCCATCTACGCAGTGAGGGCTGAAACAACGGTAGGGGAATTGCTGGAAAATGATCTAGGATGGGCAGCATGGAAGATTCACCTGGCTATTGCAAATTATGATGATAAAGTGGTGCGAAACTCGGTTGAAGAGTGGTTACGTTCGCCTTTTGTGTATCGAATGGATCTGTTTTTTGATCCTTATACTGTGATGATGGGTAGTTCACCGAGGTTTAATATGTATGGGAATGAATTTGGAATGGGAAAAGCATTGGCAGTTAGAAGTGGATATGCTAACAAATTTGATGGAAAAGTAACTTCATATCCAGGTCAAGAAGGAGGAGGGAGCATTGATCTTGAAGTGTGTCTTTCACCTGAGAAAATGATGGTTCTGGAAACAGATCAAGAGTTCATGAATTCGGCGTCGGTGTGTAGTCCTTTGTTCTAG 1374 0.3836 MNTPSLNLVSECFIKPCPPIEDSNQICYLGPWDISMLSAYYIQKGLLFKKPTSSSLNKQHFIENLVEKLKHSLSLTLFHFHPLSGRLVTKKSEDPHFYTVFVDCKNSLGAKFIHATLDITINDILSPVDVPPIVHSFFDHHRAVNHDGHTMSLLSIQVTELLDSVFIGCSMNHCIGDGTGYWNFFNSFSEIFQNDVHVPVPISHKPIHNRWFPEGYGPIISLPFKHHDEFIHRYETPILRERIFHFSAESIAKLKAKANKESDTNKISSFQSLSALVWRSLTRARQLQQGQRTTCKLAVNNRTRMEPPLPKEYFGNSIYAVRAETTVGELLENDLGWAAWKIHLAIANYDDKVVRNSVEEWLRSPFVYRMDLFFDPYTVMMGSSPRFNMYGNEFGMGKALAVRSGYANKFDGKVTSYPGQEGGGSIDLEVCLSPEKMMVLETDQEFMNSASVCSPLF* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3659 457 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 2 450 - -
Mtr3g3659 457 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 2 450 - -
Mtr3g3659 457 Pfam Transferase family 11 447 - -
Mtr3g3659 457 Gene3D - 6 221 IPR023213 -
Mtr3g3659 457 Gene3D - 231 442 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3659 Mtr-Chr3 50449568 50451221 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3659 48 441 Monolignol Biosynthesis Gene Families AT5G48930 26.506 7.93e-31 121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3659 3 50449568 50451221 Mtr3g3659 3 50449568 50451221 ECH