Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3658 ATGATGAGCACCCATTGTTTAAAACTCGTTTCTGAATGCTTTATCAAACCTTATCCTCCAATTGAAGACTCAAAGCAAATTTGCTATTTAGCACCTTGGGATATTGTCATGTTGTCTGCGAATTATATCCAAAAGGCCCTTCTCTTCAAAAAACCAACTTCATCACTAAACCAACAGCATTTCATTGACAAACTCAAACACTCCCTTTCCCTCACACTTTTCCATTTCTATCCCCTCTCAGGTCGTCTTGTTACTAAAAAATCCGAAGATCCTCATTCTTACACTGTTTTTGTCGATTGCAAAAACAGTCTCGGAGCTAAATTTATTCATGCAACTTTAGATATTACCATCAATGATATTCTCTCACCAATTGATGTCCCACCCATTGTTCATTCATTCTTTGACCATCACAGAGCAGTCAACCATGATGGACACACCATGTCTTTGTTGTCCATTCAAGTCACTGAATTATTAGACGGTGTTTTCATAGGTTGTTCCATGAACCACGCTGTTGGTGATGGAACTGCTTATTGGAATTTCTTTAATACACTTTCTGAGATATTTCAAAAGGTTGTTGATGTTGATGTTCATATTCCTGTTCCTATTTCACACCAACCTATTCACAATAGATGGTTTCCTGAAGGCTATGGTCCAATTATCAACCTTCCTTTCAAACATCACGACGAGTTTATTCATAGATATGAAGCACCTATTTTGAGAGAGAGAATCTTCCATTTTTCAGCAGAGTTTATAGCAAAACTCAAAGCAAAGGCAAACAAAGAGTGCGAGACAACGAAAATCTCTTCGTTTCAATCTTTATCTGCACTAGTTTGGAGATCTATAACTCGTGTGCGTCGACTACACCATGATCAGAGAACGACTTGCAAATTGGCTATAAACAACCGAACGAGAATGGAACCGTCTCTTCCTAAGGAATATTTTGGGAATTCAGTTTACGCAGTGAGCACTGAAACAACAAAAGGTGAGTTGCTGGAGAATGGACTAGGATTGGCATCATGGAAGATTCATCTAGCTATTGCAAAATATGATCACAGAGTTGTGCGACAATTAGTGGAAGAGTGGTTGCGGTCTCCTATAGTGGTTCGAATGGACATGTTGGTTGATCCTTACTCTGTGATGATGGGTAGTTCACCAAGGTTTAATATGTATGGGAGTGAATTTGGAATGGGAAAAGCTTTGGGAGTTAGAAGTGGATATGCTAACAAGTTTGATGGAAAAGTAACATCATATCCAGGTCAAGAAGGAGGAGGGAGCGTTGATCTTGAAGTGTGTCTTTCGCCGGAGAAAATGACGTTGCTAGAAACCGATGAAGAGTTCATGAATTCAGTTTCTGTGTTTAATCCTTTGTTCTAG 1374 0.3908 MMSTHCLKLVSECFIKPYPPIEDSKQICYLAPWDIVMLSANYIQKALLFKKPTSSLNQQHFIDKLKHSLSLTLFHFYPLSGRLVTKKSEDPHSYTVFVDCKNSLGAKFIHATLDITINDILSPIDVPPIVHSFFDHHRAVNHDGHTMSLLSIQVTELLDGVFIGCSMNHAVGDGTAYWNFFNTLSEIFQKVVDVDVHIPVPISHQPIHNRWFPEGYGPIINLPFKHHDEFIHRYEAPILRERIFHFSAEFIAKLKAKANKECETTKISSFQSLSALVWRSITRVRRLHHDQRTTCKLAINNRTRMEPSLPKEYFGNSVYAVSTETTKGELLENGLGLASWKIHLAIAKYDHRVVRQLVEEWLRSPIVVRMDMLVDPYSVMMGSSPRFNMYGSEFGMGKALGVRSGYANKFDGKVTSYPGQEGGGSVDLEVCLSPEKMTLLETDEEFMNSVSVFNPLF* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3658 457 Gene3D - 7 219 IPR023213 -
Mtr3g3658 457 Pfam Transferase family 14 447 - -
Mtr3g3658 457 Gene3D - 231 442 IPR023213 -
Mtr3g3658 457 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 450 - -
Mtr3g3658 457 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3658 Mtr-Chr3 50447349 50449196 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3658 46 441 Monolignol Biosynthesis Gene Families AT5G48930 27.078 3.53e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3658 - - gmx:100775661 672.93