Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3657 ATGAGGATCCCTTCCCTAAACATTGTTTCTGCATGTTTTATTAAACCTTATCCCCCTATCAAAGACTCAAACCAAATATGCTATCTAACACATTGGGATATTGCCATGTTATCTACACACTATATCCAAAAGGGACTTCTCTTCAAGAAACCAACATCATCACTAAACCAACAACACTTCATTGAGAACCTAGTGGACAAACTCAAACACTCTCTTTCTCTCACACTTTTTCATTATTATCCCCTGTCTGGTCGTCTTGTTACTAAAAAATCTGAAGACCCTCATTCTTACACTGTTTTCGTTGATTGCAAAAACAGTCGCGGAGCTAGATTTATTCATGCAACTTTAGATATCACCATAAATGATATTCTCTCACCAGTTGATGTCCCACCCATTGTCCAATCGTTCTTTGATCATGACAAAGCAGTCAGCCATGATGGTCATACCATGTCTTTATTAACTATTCAAGTAACTGAATTATTGGATGGTGTTTTTATAGGTTGTTCCATGAATCATTGTATAGGTGATGGGACTGGTTATTGGAATTTCTTTAACTCATTTTCTGAGATATTTCAAAATGATATTCATGTTCTTGTTCCGATTTCACATCAACCTATCCACAATAGATGGTTTCCACAAGGTTATGGTCCGATTATCAACCTTCCATTCAAACATCACGAGGAGTTTGTTCACAGATATGAAACATCCATTTTAAGAGAGAGAATCTTCCATTTTTCAGCTGAGTCTATAATGAAACTGAAAGCAAAGGCAAATGAAGAGTCTAATACAAGAAAAATTTCTTCGTTTCAATCTTTATCAGCATTAGTTTGGAGATCTATAACTCGTGCACGTCAACTACAACACGGTCAGAGAACAACTTGCAAACTGGCTACAAACAACCGAACGAGAATGGAACCACCTCTTCCGAAGGAATATTTTGGGAATTCACTTCATGCGGTGAGTGCTGAAACGACGGTAGGGGAATTGCTGGAGAATGATCTAGGATGGGCAGCATGGAAAATTCATCTAGCTGTTGTAAATCATGATGATAAAGTGGTGCGTAGGTCGGTTGAAGAGTGGTTTCGTTCTCCTTTTGTGTATCGAACAGATTTGTTTTTTGATCCTTACACTGTGATGATGGGTAGTTCACCGAGGTTTAATATGTATGGGAATGAATTTGGAATGGGAAAAGTTTTGGCAGTTAGAAGTGGATATGCTAATAAATTTGATGGAAAAGTAACTTCATATCCAGGTCAAGAAGGAGGAGGAAGCATTGATCTTGAAGTGTGTCTTTCGCCGGAGAAAATGATGGCGCTGGAAGCAGATGAAGAGTTCAACTTCTGGTGTTTACTCTCATGTTCGAGTCTTTGA 1371 0.3822 MRIPSLNIVSACFIKPYPPIKDSNQICYLTHWDIAMLSTHYIQKGLLFKKPTSSLNQQHFIENLVDKLKHSLSLTLFHYYPLSGRLVTKKSEDPHSYTVFVDCKNSRGARFIHATLDITINDILSPVDVPPIVQSFFDHDKAVSHDGHTMSLLTIQVTELLDGVFIGCSMNHCIGDGTGYWNFFNSFSEIFQNDIHVLVPISHQPIHNRWFPQGYGPIINLPFKHHEEFVHRYETSILRERIFHFSAESIMKLKAKANEESNTRKISSFQSLSALVWRSITRARQLQHGQRTTCKLATNNRTRMEPPLPKEYFGNSLHAVSAETTVGELLENDLGWAAWKIHLAVVNHDDKVVRRSVEEWFRSPFVYRTDLFFDPYTVMMGSSPRFNMYGNEFGMGKVLAVRSGYANKFDGKVTSYPGQEGGGSIDLEVCLSPEKMMALEADEEFNFWCLLSCSSL* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3657 456 Pfam Transferase family 8 445 - -
Mtr3g3657 456 Gene3D - 226 441 IPR023213 -
Mtr3g3657 456 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 5 445 - -
Mtr3g3657 456 Gene3D - 6 223 IPR023213 -
Mtr3g3657 456 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3657 Mtr-Chr3 50426547 50451064 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3657 6 440 Monolignol Biosynthesis Gene Families AT5G48930 26.096 1.87e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3657 - - gmx:100787228 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3657 3 50426547 50451064 Mtr3g3657 3 50426547 50451064 ECH