Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3656 ATGATGACATCCTCTATCGTTCAAAGAGTTTCAGAATGTTTTATCAAACCACTACACCCTATTGAAGATTCAAAGCAAATTTCTTATTTAACAGGTTGGGATATTGCTATGTCATCTATGCACTATATCCAAAAAGGCCTATTATTCAAAAAACCAACAACTTCACCAAATAATCAACAAGATTTCATTGAGAGTCTATTGAAGAAGCTTAAATACTCCCTCTCTCATGCTCTTTTCCATTTCTATCCTCTTTCTGGCCGCCTTGTCACCCACAAAACTCAACACCCTCCCTCTTATACCATTTTTGTTGATTGTAGTAACAATAACCCTGGAGCTAGATTCATCTATGCGACCGCAGACGTGACCATATCTGATATCCTCTCACCTGTTGATGTTCCTCCAATTGTTGAGTCATTCTTTGATCTCAACAAAGCAATCAACCACGACGGTCACACCATGCCATTGTTATCAATTCAAGTCACAGAGCTAGTGGATGGTGTTTTCATAGGTTGTTCCCTGAATCATTGTATTGGTGATGGTACCTCTTTCTGGAATTTTTTTAATATATGGTCTGAGATATTTCAATCTCAAAGTTGTGAAAATGAAAACGATGTTCCCATTTCGCGTCTACCTTTTCATTATCGTTGGTTTCTACAAGGTTACGGTCCACCTATTAGCCTTCCCTTCAAACATCATGAAGAGTTTATCAGCAGATATGAATCTCCCAACTTCAGAGATAGATTCTTCCATTTTACACCGGAGTCTATTGTAAAACTGAAAGCAAAGGCGAATAAGGAGTTTAACACAACAAAAATATCTTCGTTCCAGGCTTTATCAGCACATGTTTGGAGATGTGTCACACGTGCACGCGGACTAACAAATGATCAAAAAACAAGTTGTAAGTTAGCTATAAATAATCGACTAAGATTGGAACCACCTTTGCCGCAGGAGTACTTTGGAAACACAGTTGATGTGGTTAGTGCAGAAATGACTGTGGACGAATTGCTTCAGAATAATCTGGGATGGGCAGCATGGAAGGTTAATGTGGCTGTGGTGAATCACGACGACAAACAAGTGCGAAAGATGCTGAAAGAGTGGTTAGAGTCTCCTGTTGTATACCAACTCGGTCGCCACTTTGATCCCCAAAGTATCACAGTGTCTAGTTCGCCAAGGTTCAATATGTATGGGAATGAATTTGGAATGGGTAAAGCGATGGCAGTTCTGAGTGGATATGCAAACAAATTTGATGGTAATGTATCATCATATCAAGGGTATGAGCATGGAAGCATAGATTTGGCATTGACCCTTACACCTAATGCAATGAGGGCCTTGGAATTAGACGAGCAGTTCGTGAATATTGTGGTTTGA 1368 0.3969 MMTSSIVQRVSECFIKPLHPIEDSKQISYLTGWDIAMSSMHYIQKGLLFKKPTTSPNNQQDFIESLLKKLKYSLSHALFHFYPLSGRLVTHKTQHPPSYTIFVDCSNNNPGARFIYATADVTISDILSPVDVPPIVESFFDLNKAINHDGHTMPLLSIQVTELVDGVFIGCSLNHCIGDGTSFWNFFNIWSEIFQSQSCENENDVPISRLPFHYRWFLQGYGPPISLPFKHHEEFISRYESPNFRDRFFHFTPESIVKLKAKANKEFNTTKISSFQALSAHVWRCVTRARGLTNDQKTSCKLAINNRLRLEPPLPQEYFGNTVDVVSAEMTVDELLQNNLGWAAWKVNVAVVNHDDKQVRKMLKEWLESPVVYQLGRHFDPQSITVSSSPRFNMYGNEFGMGKAMAVLSGYANKFDGNVSSYQGYEHGSIDLALTLTPNAMRALELDEQFVNIVV* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3656 455 Pfam Transferase family 11 448 - -
Mtr3g3656 455 Gene3D - 231 446 IPR023213 -
Mtr3g3656 455 Gene3D - 2 223 IPR023213 -
Mtr3g3656 455 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 454 - -
Mtr3g3656 455 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3656 Mtr-Chr3 50409911 50411959 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3656 56 445 Monolignol Biosynthesis Gene Families AT5G48930 28.125 7.12e-38 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3656 - - lja:Lj1g3v1664450.1 662.529