Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3655 ATGAGTTCCTCTGTTCGACTTGTTTCAGAATGTTTTATCAAACCACTACACCCTATTGAAGATTCAAAACAAAGTTGTTATTTAACAAGCTGGGATATTGCTATGTCATCTATGCACTACATCCAAAAAGGCCTATTATTCAAAAAACCAACAATTTCACCAAATAACCAACAAGATTTCATCGAGAAACTATTGGAGAAGCTCAAACACTCCTTCTCTCATGCTCTTTTCCATTTCTATCCTCTTTCTGGCCGCCTTGTCACCCACAAAACTCAAGACCCTCCCTCTTATACCATTTTTGTTGATTGCAGTAACGATAACACCAGAGCTAGATTCATCTATGCAACTCTGGATGCAACAATATATGATATCCATAAAGCAATTAATCAGGATGCTCCACCAGTTGATGATCCGCCAATTGTGGACTCATTGTTTGATCTCGATAGAGCAATCAATCATGATGGTCACACCATGCCGTTGCTATCCATTCAAGTCACGGAATTAGGGGATGGTGTTTTCATAGGTTGTTCCATGAACCATTGTATTGGTGATGGGACTTCTTTTTGGAATTTCTTCAATATATGGTCTGAAATATATCAAGCTCAAGCAAAAGATCATGATGTTCTCATCTCGCATCAACCTTTTCATAATCGGTGGTTCCTAGAAGGTTACGGTCCACTAATTAATCTTCCGTTCAAACATTTTAACGAGTTTACAAGCAGATTTGAAGCAGTACCTAAATTGAAAGAGAAATTCTTTCACTTTAGTGCAGAGTCTATTGCAAAACTGAAAGCAAAGGCCAATAAAGAATCCAATACAAATGAAATATCTTCCTTCCAATCTTTATCGGCATTTGTTTGGAGAAGTGTGACTTGTGCACGAAGACTAAAACATGATCAAAAAACCAGTTGCAAGTTAGCCATAAACAATAGATCAAGAATCAAACCACCTCTCCCGCAAGAGTACTTTGGAAACTCAGTTGATGTGGTGAGTACAGAAACGACTGTAGGCGAATTGCTTGAGAATGATTTAGGATGGGCAGCGTGGAAGGTGCATACACTTGTTGTGAATCATGACGATAGAGAGGTGAGAGAGATGCTCAAAAAGTGGTTAGAGTCTCCGGTTGTCTACCAACTTGGTCGCCATTTTGATCCCTTCAGTGTGGTGATGTCAAGTTCACCAAGGTTCAATATGTATGGAAATGAATTTGGAATGGGAAAAGCGGTTGCAGTTCTAAGTGGATATGCAAACAAATTTGATGGCAACGTGACAGCCTATGAGGGATTTGAAGGAGGAGGAAGCATGGATTTGGCAGTGTCCCTTTTGCCTAATGCAATGAGTGCGCTAGAATCAGACGAAGATTTTATGAATGCAGTTTCTGTGGTCAATTTTTCTAATCTTCTGTAA 1407 0.393 MSSSVRLVSECFIKPLHPIEDSKQSCYLTSWDIAMSSMHYIQKGLLFKKPTISPNNQQDFIEKLLEKLKHSFSHALFHFYPLSGRLVTHKTQDPPSYTIFVDCSNDNTRARFIYATLDATIYDIHKAINQDAPPVDDPPIVDSLFDLDRAINHDGHTMPLLSIQVTELGDGVFIGCSMNHCIGDGTSFWNFFNIWSEIYQAQAKDHDVLISHQPFHNRWFLEGYGPLINLPFKHFNEFTSRFEAVPKLKEKFFHFSAESIAKLKAKANKESNTNEISSFQSLSAFVWRSVTCARRLKHDQKTSCKLAINNRSRIKPPLPQEYFGNSVDVVSTETTVGELLENDLGWAAWKVHTLVVNHDDREVREMLKKWLESPVVYQLGRHFDPFSVVMSSSPRFNMYGNEFGMGKAVAVLSGYANKFDGNVTAYEGFEGGGSMDLAVSLLPNAMSALESDEDFMNAVSVVNFSNLL* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3655 468 Pfam Transferase family 5 455 - -
Mtr3g3655 468 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 2 459 - -
Mtr3g3655 468 Gene3D - 240 451 IPR023213 -
Mtr3g3655 468 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 2 459 - -
Mtr3g3655 468 Gene3D - 5 239 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3655 Mtr-Chr3 50407488 50409278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3655 47 450 Monolignol Biosynthesis Gene Families AT5G48930 27.635 2.59e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3655 - - lja:Lj1g3v1664450.1 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3655 3 50407488 50409278 Mtr3g3655 3 50407488 50409278 ECH