Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3653 ATGATGACTTCCCCTATCATTCAACGTGTTTCAGAATGTTTTATCAAACCACTACACCCCATTCCAGAGTCAAACCAAAATTGCTATTTGACAACTTGGGATATTGCCATGTCCTCTATGAACTATATCCAGAAAGGCCTCTTATTCAAAAAGCCAAATAACCAACAACATTTCATTCATAATCTTTTAGAGAAACTCAAACACTCCCTCTCTCTTGCTTTATTTCATTTCTATCCTTTATCAGGTCGTCTTGTTACACAAAAATCCCAAGACCCTCCCACTTATAATATTTTCGTTGATTGCAGTAACAATAACTCCGGAGCTAGATTCATCCATGCAACTTTGGATGCAACAGTATCTGATATCATGACACCAATTGATGTTCCATCAGTTGTTAAGTCATTGTTTGATCTTAATAAAGCAATCAACCACGACGGTCACACCATGCCGTTGTTATCCATCCAAGTCACTGAGCTAGTAGATGGTGTTTTCATAGGTTGTTCTATGAATCACTATATTGGTGATGGAACTTCTTATTGGAATTTCTTTAATACATGGTCTGAAATATTTCAAGGCCAAGGCCATGATGTTCGCATTTCACGCCAACCCTCACACATTCGTTGGTTTCCAGAAGGTTATGGTCCACTGATCAATCTTCCATTCAAACATCATGACGAGATTATAACTAGGTATGAACCACCCAAGCTGAGAGAGAGATTCTTCCATTTTACAGCAGAGTCTATTGCAAAGTTGAAAGCTAAGGCCAATATGGAGTCTAATACAAACAAAATCTCTTCATTCCAATCTTTATCAGCACATGTTTGGAGAGGTATAACTCGTGCTCGCGACCTAACGAATGATCAAGTAACAACTTGTATGTTAGCCGTAAATAATCGACCGAGAATGAAACCACCTCTTCCAAAAGAGTATTTTGGGACCTCAGTTGACACAGTGAGTGTAAAAACAACCGTAGGTGAATTGCTAGAAAATGATTTGGGATGGGCAGCATGGAAGGTGCATAGTGCTGTAGCAAACCATGTTGACCTAGAGATACGAAAGATGGTCAAAAAGTGGTTAGAGTCTCCTATGATATTAAGCCTTAAACACCACTTTGATGCCGGTAGTGTGGCAATGATAAGTTCACCAAGGTTTAATATGTATGGAAATGAATTTGGAATGGGAAAACCAGTGGCAGTTTTGAGTGGTTATGCAAACAAATGTGATGGGAATGTGACAGCATATGAGGGACATGAAGGAGGAGGGAGCATGGATTTGGAAATTTCTCTTTCTCCAAATGTAATGAGAGCCCTCGAATTGGATCAGAATTTCATGAATGCAGTTTCTCTCTAA 1350 0.3911 MMTSPIIQRVSECFIKPLHPIPESNQNCYLTTWDIAMSSMNYIQKGLLFKKPNNQQHFIHNLLEKLKHSLSLALFHFYPLSGRLVTQKSQDPPTYNIFVDCSNNNSGARFIHATLDATVSDIMTPIDVPSVVKSLFDLNKAINHDGHTMPLLSIQVTELVDGVFIGCSMNHYIGDGTSYWNFFNTWSEIFQGQGHDVRISRQPSHIRWFPEGYGPLINLPFKHHDEIITRYEPPKLRERFFHFTAESIAKLKAKANMESNTNKISSFQSLSAHVWRGITRARDLTNDQVTTCMLAVNNRPRMKPPLPKEYFGTSVDTVSVKTTVGELLENDLGWAAWKVHSAVANHVDLEIRKMVKKWLESPMILSLKHHFDAGSVAMISSPRFNMYGNEFGMGKPVAVLSGYANKCDGNVTAYEGHEGGGSMDLEISLSPNVMRALELDQNFMNAVSL* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3653 449 Pfam Transferase family 12 443 - -
Mtr3g3653 449 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 447 - -
Mtr3g3653 449 Gene3D - 3 213 IPR023213 -
Mtr3g3653 449 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 447 - -
Mtr3g3653 449 Gene3D - 223 439 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3653 Mtr-Chr3 50403069 50404695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3653 49 438 Monolignol Biosynthesis Gene Families AT5G48930 27.512 6.30e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3653 - - lja:Lj1g3v1664450.1 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3653 3 50403069 50404695 Mtr3g3653 3 50403069 50404695 ECH