Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3649 ATGAATTTCAAGGGTTTTGGGAATGATCCAGGAGCCTCCGGCAACGGAGGTGGGAGGATAGCGGCGGGGAATTTTCCGCTGACGAGGCAACCGTCAGTGTATTCGCTGACTGTTGATGAATTTATGAACAGTATGGGGGGTTCTGGAAAAGATTTTGGGTCAATGAACATGGATGAATTGTTGAAGAATATTTGGAGTGCTGAAGAGGTTCAAACAATGGGTGGTGAAGAAGCTATTAGTAATCATTTGCAAAGACAAGGTTCGTTGACGCTGCCGCGAACTCTTAGTCAGAAAACGGTTGATGAGGTTTGGAAGGATATTTCTAAGGATTATGGTGGTCCTAATTTGGCTGCACCAATGACTCAGAGACAACCAACTTTGGGGGAGATGACTTTGGAAGAATTTTTGGTTAGAGCTGGTGTTGTTAGAGAAGATGCTAAGCCAAATGATGGTGTTTTTCTTGATCTTGGTAATGTTGGAAATAATGGTAATTTGGGTTTGGCTTTTCAGGCTCAGCAGATGAATAAAGTTGCTGGCTTTATGGGGAATGGTAATAGAATTAATGGTAATGATGATCCACTTGTTGGTCTTCAAAGTCCTACTAATTTGCCTTTGAATGTTAATGGGATTAGATCAACAAATCAGCAACAACAGATGCAGAATTCACAGTCTCAGGCTCAGCAACAACATCAGAATCAACAACTTCAGCAACTTCAACAGCAGCAGCAGCAGCAGCAAATATTTCCAAAGCAACCTGGTTTGAACTATGCAACTCAGATGCCTTTGTCTAATAATCAAGGAATGAGAGGTGGAATTGTAGGGCTTTCTCCTGATCATGGAATGAATGGTAATCTTGTGCAAGGTGGAGGGATTGGAATGGTTGGTTTGGCACCAGGGGCTGTTCAAATCGGTGCTGTCTCACCGGCTAACCAGATATCTAGTGATAAAATGGGAAAGAGTAACGGTGATACTTCTTCTGTTTCGCCGGTTCCTTATGTTTTTAATGGTGGTATGCGAGGGAGGAAAGGTAATGGAGCTGTGGAGAAGGTAATTGAGAGGAGGCAGAGAAGAATGATCAAGAATAGGGAGTCAGCTGCTAGATCCCGCGCTCGCAAGCAGGCTTATACCATGGAATTGGAAGCAGAAGTCGCAAAGTTAAAAGAAGAGAATGAAGAACTTCAGAAAAAGCAGGAAGAAATCATGGAACTTCAGAAAAATCAAGTTAAAGAAATGATGAATTTGCAACGAGAAGTCAAGAGAAAATGCTTAAGAAGAACACAAACTGGTCCATGGTAG 1296 0.4236 MNFKGFGNDPGASGNGGGRIAAGNFPLTRQPSVYSLTVDEFMNSMGGSGKDFGSMNMDELLKNIWSAEEVQTMGGEEAISNHLQRQGSLTLPRTLSQKTVDEVWKDISKDYGGPNLAAPMTQRQPTLGEMTLEEFLVRAGVVREDAKPNDGVFLDLGNVGNNGNLGLAFQAQQMNKVAGFMGNGNRINGNDDPLVGLQSPTNLPLNVNGIRSTNQQQQMQNSQSQAQQQHQNQQLQQLQQQQQQQQIFPKQPGLNYATQMPLSNNQGMRGGIVGLSPDHGMNGNLVQGGGIGMVGLAPGAVQIGAVSPANQISSDKMGKSNGDTSSVSPVPYVFNGGMRGRKGNGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELQKKQEEIMELQKNQVKEMMNLQREVKRKCLRRTQTGPW* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3649 431 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 6 431 - -
Mtr3g3649 431 CDD bZIP_plant_BZIP46 353 407 - -
Mtr3g3649 431 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 6 431 IPR043452 GO:0003700|GO:0045893
Mtr3g3649 431 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 356 371 IPR004827 GO:0003700|GO:0006355
Mtr3g3649 431 MobiDBLite consensus disorder prediction 213 248 - -
Mtr3g3649 431 SUPERFAMILY beta-sandwich domain of Sec23/24 198 263 - -
Mtr3g3649 431 Coils Coil 221 245 - -
Mtr3g3649 431 SMART brlzneu 349 414 IPR004827 GO:0003700|GO:0006355
Mtr3g3649 431 Coils Coil 369 421 - -
Mtr3g3649 431 SUPERFAMILY Leucine zipper domain 353 402 IPR046347 GO:0003700|GO:0006355
Mtr3g3649 431 Pfam bZIP transcription factor 353 405 IPR004827 GO:0003700|GO:0006355
Mtr3g3649 431 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 351 402 IPR004827 GO:0003700|GO:0006355
Mtr3g3649 431 Gene3D - 351 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3649 Mtr-Chr3 50324649 50329434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3649 27 385 bZIP Transcription Factor Family AT1G45249 50.000 1.08e-94 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr3g3649 bZIP_1 4.4e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3649 K14432 - gmx:100819313 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3649 3 50324649 50329434 Mtr3g3649 3 50324649 50329434 ECH