Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3635 ATGGTGGCAAAAGCATCATCATACGAAGAGAGTCGCCGCAAGAGAATGGAAGAGAATCAAAAGAGAATGGAAGCTCTGAGTCTTACCAAGCTCTCTCAATCTCTTCACAAATCATCTTCCCCCATTTCAAAACCCTCACCTTCCAAACCTCGCACTCCTATCAAGAAAGAGCTCGTTGTTGTTCGAAGATCCGGCCGTGTCGCCAATATGCCTGCTCCTGTTTACAAAGAAATTCTTATTGATTCCGTTAAGATACCTAGAAATAGAATTTCAAGATGTGGTGGATATGATAAGTACAGGGATTATTCGAAGCGGGTGTATGCGTCGGACGAAGCTAGAATGGAAGCAATGGAGAAGGCTGATAAGTTGCTGTCCGATTTAGATTCTGATCATCCAACTTTTGTCAAGTCAATGCTCCAATCTCATGTCACTGGTGGATTCTGGCTGGGCCTTCCAAATCATTTCTGCAGGAAAAACCTTCCAAAACGGGACGAAGTGATGACTTTAATTGATGAGGATGGGGATGAGTCTCCAACTACATATTTGGCTCACAAAACAGGACTTAGTGCTGGATGGAGAGGTTTCGCTATTGCTCATAACCTTGTTGATGGGGATGCTTTAATTTTTGAGTTAGTTAAACGCACTGCATTCAAGGTGTACATTATTAGAGTGAATGAGGGTAAACAGGACGATTGA 696 0.4282 MVAKASSYEESRRKRMEENQKRMEALSLTKLSQSLHKSSSPISKPSPSKPRTPIKKELVVVRRSGRVANMPAPVYKEILIDSVKIPRNRISRCGGYDKYRDYSKRVYASDEARMEAMEKADKLLSDLDSDHPTFVKSMLQSHVTGGFWLGLPNHFCRKNLPKRDEVMTLIDEDGDESPTTYLAHKTGLSAGWRGFAIAHNLVDGDALIFELVKRTAFKVYIIRVNEGKQDD* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3635 231 ProSiteProfiles B3 DNA-binding domain profile. 134 225 IPR003340 GO:0003677
Mtr3g3635 231 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 4 227 IPR044837 -
Mtr3g3635 231 MobiDBLite consensus disorder prediction 25 45 - -
Mtr3g3635 231 Pfam B3 DNA binding domain 134 223 IPR003340 GO:0003677
Mtr3g3635 231 Gene3D - 109 227 IPR015300 -
Mtr3g3635 231 MobiDBLite consensus disorder prediction 1 53 - -
Mtr3g3635 231 SUPERFAMILY DNA-binding pseudobarrel domain 127 225 IPR015300 -
Mtr3g3635 231 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS03G0184500 4 227 - -
Mtr3g3635 231 SMART B3_2 134 225 IPR003340 GO:0003677
Mtr3g3635 231 MobiDBLite consensus disorder prediction 7 24 - -
Mtr3g3635 231 CDD B3_DNA 132 223 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3635 1 231 B3 DNA Binding Superfamily AT3G19184 55.556 9.62e-76 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mtr3g3635 B3 1.1e-14 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3635 3 50178739 50182816 Mtr3g3635 3 50178739 50182816 ECH