Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3615 ATGACTCCTACTACTACTAACAAATCTTGTTCTTCTTCTTCAAGCCAAGGTAGTAAAGGACAATCGATTCAACAACGTAGGCTTACTAGACAGAAAAGGTTATGTTACCCTAACGACCAAGACGTTGGTGAATCTTTTCATTCAACTGACGTTGCTGTTTCTTTTTCTTTACCTACTTCTCCTTATCGGACTAGCTCTGATCATTGGTCTACGTCCGCTGTTCCTCAACCGCTTCCACTTCCTGAGTCACCGTTGACCACCCGACGACCCGATCATCATGCTGCCGCCTTACCTTTTTCCAGAAAGTCGGCGGATCATGATACTGTGAGAAGTTTAAGGTCTTCCAGCAATTTGGGCAGACATTTTTTTAACACAGTGACTGGAAATGCAAAGAGTGATTTGAGAGTGAATATTCCGCCTACCAGAGGCTTGGTGTCAAGCAATAGTTCTTGTAAAGATACTAGAAAACACTCTCATGATAATGACTGTGAAGGTATTTCCAACTCAAAATTGCAATTTGCTGCCAAGAGTGCCCCAAACAGCATATTCTCCAGTCCTGTTACCAGTCCGCGCCGATTAAGCAGTGTTGATTTACTTGATCCTTCTATCATTCTTCCTCAAGATTTTAATGACATGTTCAGAGTGTTGCCTGCTAAAACTGCTCATAGTCCAGACTTGTCTCCTCGTCGTAGCTTTGGGAACCACAGTCCTGCTAACCACCACCGCCACACTATTCAAGGGGGTTCTCAGCAGCACTCTAAATTTTGCACCAGAGTGTGGCCTGAAAATAACCATTTAGATGCACATCCATTACCCCTTCCACCTAGAGCTTCACCACAGCCACAACAATCACCTGCACATCAGTCAAGTGTCACGATGAATCACTCAACAGAAAACATCCATTCGATGAAGGGTCATTGGCAGAAAGGAAAACTTATTGGACGGGGATCGTTTGGAAGTGTTTATCATGCAACAAACCTAGAGACCGGAGCCTCATGTGCACTAAAAGAGGTGGATCTGGTTCCTGATGATCCTAAATCTACTGACTGCATAAAGCAACTCGATCAGGAAATCAGAATTCTTGGCCAACTACACCACCCCAACATCGTGGAATATTATGGCAGTGAAGTAGTTGGTGATCGATTGTGCATATATATGGAATATGTCCATCCTGGATCACTTCAGAAGTTTATGCAAGACCATTGTGGGGTTATGACAGAATCTGTGGTTCGCAATTTTACGAGGCATATTCTCTCTGGACTGGCGTACTTACACAGTACCAAGACTATCCACAGGGACATTAAAGGTGCAAACTTGCTGGTTGATGCATCAGGCATTGTCAAGCTTGCAGATTTTGGGGTGTCGAAAATTCTGACAGAGAAATCATATGAACTTTCGCTGAAAGGAAGTCCCTACTGGATGGCTCCAGAGCTCATGATGGCTGCCATGAAGAATGAAACCAATCCCACTGTTGCCATGGCTGTTGATATATGGAGCTTAGGATGCACCATCATTGAAATGCTGACTGGAAAACCCCCTTGGAGCGAGTTTCCAGGGCATCAAGCCATGTTCAAGGTACTGCACAGATCCCCGGACATACCCAAAACATTATCTCCAGAAGGACAAGATTTCCTTGAGCAGTGTTTTCAAAGGAATCCTGCAGATCGACCATCCGCAGCGGTGCTTCTAACACATCCATTTGTACAAAATTTGCATGAACAAGATGTTATAGTTCATTCACACGGCTGTCATAAGGAAGACACCGTAGTTTATTCACAAGGCTGCCCTAAGGAAGACACCGGCCCCAGAGATGAATCGCGTAAACACAGTCCAGGGCACGGTTCAAAACATAGCCGTGGTGTGGTGCCATCCTCCTTTCGTGCACGAATTTTTTGCAAATTTCAAAACTTAATCGGTGACACTTCCAAAAAAGCTGATACCGAGGAATCCAAACACATTAGATCTTCTCCTGTATCTCCTTGCTCGCTGACCGATGATAACAGTCCTCAATCTCCCTTTAAATCTAGTAACCGCAATTGTATGACCGTTACCAAATCCTCCAACATACCCTTCGCCATTATGAGAATCGTGAAGCACCTATGA 2103 0.4441 MTPTTTNKSCSSSSSQGSKGQSIQQRRLTRQKRLCYPNDQDVGESFHSTDVAVSFSLPTSPYRTSSDHWSTSAVPQPLPLPESPLTTRRPDHHAAALPFSRKSADHDTVRSLRSSSNLGRHFFNTVTGNAKSDLRVNIPPTRGLVSSNSSCKDTRKHSHDNDCEGISNSKLQFAAKSAPNSIFSSPVTSPRRLSSVDLLDPSIILPQDFNDMFRVLPAKTAHSPDLSPRRSFGNHSPANHHRHTIQGGSQQHSKFCTRVWPENNHLDAHPLPLPPRASPQPQQSPAHQSSVTMNHSTENIHSMKGHWQKGKLIGRGSFGSVYHATNLETGASCALKEVDLVPDDPKSTDCIKQLDQEIRILGQLHHPNIVEYYGSEVVGDRLCIYMEYVHPGSLQKFMQDHCGVMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDASGIVKLADFGVSKILTEKSYELSLKGSPYWMAPELMMAAMKNETNPTVAMAVDIWSLGCTIIEMLTGKPPWSEFPGHQAMFKVLHRSPDIPKTLSPEGQDFLEQCFQRNPADRPSAAVLLTHPFVQNLHEQDVIVHSHGCHKEDTVVYSQGCPKEDTGPRDESRKHSPGHGSKHSRGVVPSSFRARIFCKFQNLIGDTSKKADTEESKHIRSSPVSPCSLTDDNSPQSPFKSSNRNCMTVTKSSNIPFAIMRIVKHL* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3615 700 SMART serkin_6 307 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3615 700 ProSitePatterns Protein kinases ATP-binding region signature. 313 336 IPR017441 GO:0005524
Mtr3g3615 700 MobiDBLite consensus disorder prediction 594 620 - -
Mtr3g3615 700 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 7 693 - -
Mtr3g3615 700 MobiDBLite consensus disorder prediction 1 30 - -
Mtr3g3615 700 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 7 693 - -
Mtr3g3615 700 MobiDBLite consensus disorder prediction 221 253 - -
Mtr3g3615 700 Gene3D Transferase(Phosphotransferase) domain 1 304 602 - -
Mtr3g3615 700 MobiDBLite consensus disorder prediction 266 293 - -
Mtr3g3615 700 ProSiteProfiles Protein kinase domain profile. 307 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3615 700 SUPERFAMILY Protein kinase-like (PK-like) 280 577 IPR011009 -
Mtr3g3615 700 MobiDBLite consensus disorder prediction 643 676 - -
Mtr3g3615 700 MobiDBLite consensus disorder prediction 654 676 - -
Mtr3g3615 700 Pfam Protein kinase domain 308 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3615 700 MobiDBLite consensus disorder prediction 227 253 - -
Mtr3g3615 700 MobiDBLite consensus disorder prediction 62 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3615 Mtr-Chr3 50012153 50017560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3615 267 570 MAP Kinase Kinase Kinase AT5G66850 65.385 8.92e-146 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mtr3g3615 Pkinase 1.6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3615 - - gmx:100781764 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3615 3 50012153 50017560 Mtr3g3615 3 50012153 50017560 ECH