Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3610 ATGTTTGCCAAGGGTTTTCATCATGGTGGGAGTACTTGGAGAGATATACCAAGAAATTCTTCATCAGTTTTCTCGAACATTCCGCCAAAGAGATGTTTTGATGAATTAAGCAATCAAATAGGATTCTCCTCAGACTGGCGGTATCATCCTGAAATGGTATACAACCGTAATTGGATAAGAAGAAAAATTTTTGAAATCATTCAGAATGAGCAACTTGGGCCTGCGCTGGAAATATTGCTACTTACCAATGCTGCTTCAAAGGAGGAATATATGAACCTGGAGACATTGAATCAGCGTGTGCAAGCTCTACTGGGTGTTCCTAAGTCCTATAATACTGGTTACTATGGTGTGCAAGAAGCGGGAATATCTCATCCTTCTATTGCTCATAACCTGCCTTGTTTTCCTGGTGATGGTTCATCTATCCCTCCAGTTGCTGATATGGATGTGCTTTCTAACTTACCTGTTTCTTATGGTGGATTCAATCTGGATGCCAACACCAGATCAACTAGCAACTATTTTTCTCAGCAACACTCAAATAATTTGGAGATGGATCTGACAAAATACAAAGATTGTTTTCCTACTACAATGGGAAGATCCCTCCAATCTGAAGATTCAAGTTTTATGTTCTCTCAATCTGCCTCAGTGAATACTTCGGAAGATACAATGCAATATCAACCACAGAAGTTGGATTTTCAGAAGAATTCCACTGTAAGACATGTTGTTAATGATGTCCCTTCTGATAATACTGAATACATACTACGACCTGCCAAAATACCGAAAATGATGGATTCAGGTTTTGGTGTATCTTCGACTAACCATCCAAGTTTTGATCAATGGAATAATGGGATGGTTCAACCTTATTCTTTTCAACCACATCCAGAAGTGCAGCAACATTCAGAATTTCCCCTCTCTTCTCTCCATTATGAGAGTAATGTGGAACAAATTACAAATCCAATTTTTCATTTTGCGGGAGTTAAGGGGATAAACAACAATGTAATGGTTGATACATTTGGACAGCCCGGGCTTGAAAGCTATGATGTGATGGATAGCAACAACTTAAAGAATATTGTCACGGGTATAAAGTCCAGGATGCAATATCTCGACATGGATCCTATTCCTACTAATGGAGAGGATATACAAGGCAGAACTGAATTTGACCACGGCATCAGATTAAATTCCAGTATGCCTACTCTCACCAAGGAGCCTATTCCTACTGCATTCTGGACAAATGCCAAAAAGAAAGCCGATGAGGTAACATTTGATCAAGAGAAGCTAACAAAGTCCTCAGTTACAACTGTTAGTGGGAAAACGAACTACGTGATTTATGATTTGACTTCTGAGCCTAAAATGATTCCCTCGAAAGGCTTAGAAGCTGGTCGAATATCATATGAGCCAGATTCCCTAATCTATGGCATGATAGACTGCCGAAAATCAGTGGAAGTCGACCGTGTCCCAGAACTTATTACAATTGATGGTGATGATGATGAAGAGGACATACAAGGAAGAATTGGATTCAACCACGAGGGGACAGACGCTAAAGAGAAAGTGAGTGAACCAAAAGTTGATCAAGAGAAGAAAGATCTTGAAAGCCATGTCGTGATAGACAGTTGCAAATCAATGGAAATTGACATTGGGTCGAATTCGAATATACCTGCTCTCATAAGCAAGGTTGCTATTCCTATTGATGTAGATGACAAACAAAATAAAATTGGATTCAACCAAGAGGGGACAGATGCTAAAGAGAAAGTCAGTGAACCAACACCTGATCAAGAGAAGCAAACAAAATTGTCAAACACAATTGTTGATGCTGTTTCCTTGATTGATTTGTTCACACGTGATCAAATTACAGAACATATTAATAGTCTCAGAAAGGAATCTGTTCTGATTACTTCTGAGGAGGAAGCAGGGACTGAAGCAAACACATGCCAATTATGTGAAAGGAAAAAGCTTTACTTTGCACCAGTACCAATTGTTTGTTCATGTTGTGGCATACGCGTCAAGAGAATATATTTCTGTAGAAAAGAAGAATTGGATGTACAGGGTTGCATTTGCTCCATGTGTTACAAGACTTCTAAAGGTGGGAAAATCACATTCAATGGGACATCTATTTCTAAGAAAAATCTCGAAAAAAGGACTAACGATGAAGTACTTGAAGAACCGTGGGTTGAATGCAATAAATGCAAAAGATGGCAACATCAAATATGTGCACTCTACAACAACAGAAGAGATTTGGATTGCAGAGCTGAGTATATATGTCCTATATGCCGCTCAAAAGAAATTGAAAATGGAAAGCATGCTCACTTACTGAAGGCTGCTAATTTTGGTGCTAAGGACTTGCCAAGAACCGTGCTAAGTGACCACTTAGAAAAAAGACTTATTGAGTGTCTCATCCAAGAGAGAGCAAAGTGGGAAAATGTTGAAGGGAACGAGAATCTTGATAAGGTTATAGCTGCAAAAGGTCTTTCTATTAGAGAAGTGTTATCCGTCGACAAACAATTGAAAGTGAATAAGCAGTTTCTGGATATCATTCCAGAGGAGAATTACCCTGCTGAATTCTCTTATAGATCAAGAGTTATTCTTCTGTTTCAGCAGATTGAAGGAGCAGATATATGCATTTTTGGAATGTATGTCCAGGAGTTTGGCTCTGAATGCGGAAATCCGAATCAGCGTTGTGTATACATTTCATATCTTGATTCTGTCAAGTATTTTATGCCTGAAAGAAGGACAAAGAGTGGAGAAGCCCTTCGTACCTTCGTTTACCATGAGATATTGATTGGATACCTTGATTTTTGTAAAAAAAGGGGTTTCCTGACTTGCTACATATGGGCCTGTGCTCCTTCAAGAAAAGGGGATGATTATATACTATATTGCCACCCCAAAGAGCAAAAGACTCCGAAGAATGATAAGCTACGCCGGTGGTATCTTTCAATGTTAAAAAAGGCTACTGAAGAAAATATCGTTGTTGGTTTAACCAACGTATATGATCATTTTTTTGTTGCTGCTGAGAAAGGGGACTCCAAGGTGACAGCTTCTCGTTTGCCATACTTTGATGGAGACTGCTGGTCTGGTAATGCTATGGAAGCAGCCAAGACCATTGAAAAAGAGTGTGGAGGAGACTATGAAAAGATGTTGAAGGAACAAGTGCCAAATAGAGCTTTAAAGACCATGGGACATGCCAATCCTTCCAAAGACACTGCCAAAGACATTTTAGTGATGCGAAAAGTTGGCCAAAATATATGGCCTACCAGGGAAAGCTTCCTTATAGCTCACTTGCAATATGCATGCATACACTGCCGTGAAGTGATAGTGTCTGGGAAGCGATGGTTTTGCACTGAATGCAAGGAAATTCAGGAGTGCGAAAGATGCCATAGTTCTGATGCACACCCTTCAAAGAATGGTGACTTGCATACACTTTGTCAGGCCGTTGTTGATGATATCCCCTCCAACACTAAACATAATGATATTGTCCTTGAGAGTAGATTATTTGAAAATAGGGATAACTTTTTGAGCTTCTGCCAGAAGTCTCAGTTTCAGTTTGACACACTCCGTCGTGCCAAGTATTCCTCGATGATGGTCCTTTACCATCTACACAATCCTACTCTGATGACTGTTGTAAAATGTTGTAGCATCTGTAGTGCACGCAATGTATTCCAAAAGAGCTGGAAATGTGAGATTTGTCCAGAGTGTACCATTTGCTCTGCATGCTATAAGGATAGAGGTGCTGACTGCCATGAACACAAGTTGACTCAAAATGAACACAAGCTCACTCAAAATGAACTCAAGTTGACTCAAAATTATTCAAGACCAATATATCAATCTGGGAATCAGGAGTCAAATGAGAAAATGATGGTGAAACTGCTGAACGTTTTAAAGCATGCATCTCAATGCCGTGCAGATAATGCTGAACCTTGCTCTCATCCAAACTGTTCTCAAATCAAGAAGCTGTTCTCTCATGCCAGTAGGTGCGAAATTCGAGTGAATCGGGGCTGCCAGCAGTGTAAAAAGATATGGTTTATACTTGCTGCTCACTCTAGGAATTGCAAAGACTCGGAGTGTAGCATTCCACGGTGCAGGGATCTAAAGAAGCATCTAGAATCGAAAGCAATGCATTCCGAATCTTGGCGTGGAACTGCAGTTTTTGAAAGTGACAAAGCAGTCGTTGATCAATGA 4170 0.399 MFAKGFHHGGSTWRDIPRNSSSVFSNIPPKRCFDELSNQIGFSSDWRYHPEMVYNRNWIRRKIFEIIQNEQLGPALEILLLTNAASKEEYMNLETLNQRVQALLGVPKSYNTGYYGVQEAGISHPSIAHNLPCFPGDGSSIPPVADMDVLSNLPVSYGGFNLDANTRSTSNYFSQQHSNNLEMDLTKYKDCFPTTMGRSLQSEDSSFMFSQSASVNTSEDTMQYQPQKLDFQKNSTVRHVVNDVPSDNTEYILRPAKIPKMMDSGFGVSSTNHPSFDQWNNGMVQPYSFQPHPEVQQHSEFPLSSLHYESNVEQITNPIFHFAGVKGINNNVMVDTFGQPGLESYDVMDSNNLKNIVTGIKSRMQYLDMDPIPTNGEDIQGRTEFDHGIRLNSSMPTLTKEPIPTAFWTNAKKKADEVTFDQEKLTKSSVTTVSGKTNYVIYDLTSEPKMIPSKGLEAGRISYEPDSLIYGMIDCRKSVEVDRVPELITIDGDDDEEDIQGRIGFNHEGTDAKEKVSEPKVDQEKKDLESHVVIDSCKSMEIDIGSNSNIPALISKVAIPIDVDDKQNKIGFNQEGTDAKEKVSEPTPDQEKQTKLSNTIVDAVSLIDLFTRDQITEHINSLRKESVLITSEEEAGTEANTCQLCERKKLYFAPVPIVCSCCGIRVKRIYFCRKEELDVQGCICSMCYKTSKGGKITFNGTSISKKNLEKRTNDEVLEEPWVECNKCKRWQHQICALYNNRRDLDCRAEYICPICRSKEIENGKHAHLLKAANFGAKDLPRTVLSDHLEKRLIECLIQERAKWENVEGNENLDKVIAAKGLSIREVLSVDKQLKVNKQFLDIIPEENYPAEFSYRSRVILLFQQIEGADICIFGMYVQEFGSECGNPNQRCVYISYLDSVKYFMPERRTKSGEALRTFVYHEILIGYLDFCKKRGFLTCYIWACAPSRKGDDYILYCHPKEQKTPKNDKLRRWYLSMLKKATEENIVVGLTNVYDHFFVAAEKGDSKVTASRLPYFDGDCWSGNAMEAAKTIEKECGGDYEKMLKEQVPNRALKTMGHANPSKDTAKDILVMRKVGQNIWPTRESFLIAHLQYACIHCREVIVSGKRWFCTECKEIQECERCHSSDAHPSKNGDLHTLCQAVVDDIPSNTKHNDIVLESRLFENRDNFLSFCQKSQFQFDTLRRAKYSSMMVLYHLHNPTLMTVVKCCSICSARNVFQKSWKCEICPECTICSACYKDRGADCHEHKLTQNEHKLTQNELKLTQNYSRPIYQSGNQESNEKMMVKLLNVLKHASQCRADNAEPCSHPNCSQIKKLFSHASRCEIRVNRGCQQCKKIWFILAAHSRNCKDSECSIPRCRDLKKHLESKAMHSESWRGTAVFESDKAVVDQ* 1390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3610 1389 PANTHER HISTONE ACETYLTRANSFERASE HAC2 527 1362 - -
Mtr3g3610 1389 SMART TAZ_2 1277 1358 IPR000197 -
Mtr3g3610 1389 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 773 1201 IPR031162 GO:0004402
Mtr3g3610 1389 SMART KAT11_2 808 1102 IPR013178 GO:0004402|GO:0006355|GO:0016573
Mtr3g3610 1389 SMART PHD_3 683 756 IPR001965 -
Mtr3g3610 1389 Gene3D - 1088 1136 IPR043145 -
Mtr3g3610 1389 SUPERFAMILY FYVE/PHD zinc finger 718 758 IPR011011 -
Mtr3g3610 1389 SUPERFAMILY RING/U-box 1184 1239 - -
Mtr3g3610 1389 ProSiteProfiles Zinc finger ZZ-type profile. 1090 1143 IPR000433 GO:0008270
Mtr3g3610 1389 SUPERFAMILY RING/U-box 1071 1130 - -
Mtr3g3610 1389 Pfam TAZ zinc finger 1285 1357 IPR000197 -
Mtr3g3610 1389 MobiDBLite consensus disorder prediction 573 589 - -
Mtr3g3610 1389 SUPERFAMILY TAZ domain 1277 1361 IPR035898 -
Mtr3g3610 1389 ProSiteProfiles Zinc finger TAZ-type profile. 1276 1360 IPR000197 -
Mtr3g3610 1389 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 714 759 IPR013083 -
Mtr3g3610 1389 CDD PHD_HAC_like 683 755 - -
Mtr3g3610 1389 PANTHER CBP/P300-RELATED 527 1362 IPR013178 GO:0004402|GO:0006355|GO:0016573
Mtr3g3610 1389 Coils Coil 1383 1389 - -
Mtr3g3610 1389 Gene3D TAZ domain 1272 1387 IPR035898 -
Mtr3g3610 1389 Pfam Histone acetylation protein 812 1022 IPR013178 GO:0004402|GO:0006355|GO:0016573
Mtr3g3610 1389 ProSiteProfiles Zinc finger PHD-type profile. 681 758 IPR019787 -
Mtr3g3610 1389 MobiDBLite consensus disorder prediction 573 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3610 Mtr-Chr3 49969565 49977606 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Mtr3g3610 HAT_KAT11 2.9e-27 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3610 K04498 - aprc:113866525 1134.78