Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3601 ATGCAAGTCCAGGGCTGGTTTCTCTTGTTCTCATTTTTCCTCTTTTCACCAACATCATTTTTCTCTCATGCAATTTCCAATGAAGAAGCCGCTTCCATTGCTCGTCGTCAAATGTTACATCTTCAAGAAAATGAGGATTTACCCGAAAACTATGTAGATACCTATAAAACAGATTTAAAATTTCCTAATCCTAATCTCAAAAGTGCTTACATAGCACTACAAGCATGGAAAAAAGCAATTTATTCAGACCCAACCAACTTCACATCAAATTGGGAGGGCCCTAATGTTTGTTCTTACAATGGAATTTTTTGTGCAGCTTCTCTTAATGATTCAAAAATTCAAGTTGTAGCTGGGATTGATCTTAATCAAGCAGACATTGCAGGATACATTCCTGCTGAGTTTGGTTTGTTAGCTGATATTGCTCTTTTGCATATAAACTCAAATAGGTTTTGTGGGGTTCTCCCAAAAAGTTTTTCAAAGTTAAAGCTTTTGCACGAGTTGGATATTAGTAACAACCGTTTTGTTGGAAAATTCCCTTGTCATGTTCTTTCAATTCCAGATATAAAATTCATTGATATCAGGTTCAATGAATTTGAAGGAGAAATTCCTCCAGAGCTTTTTAACAAAACACTCGACGCTATATTTATAAACAACAACAGATTCACATCAACAATACCAGAAAATATGGGAAATTCTCCAGCATCAGTCATTGTTTTTGCCAACAACGGTATTAGTGGTTGTATTCCTTCAAGCATTGGCCAAATGAAAAATTTGAATGAGTTTGTTGTAATCGGTAATAACCTTACTGGTTGTTTGCCTGAGGATATTGGAAAGCTTCAACAGTTAGCCGTTTTTGACGTGAGTGAGAACTTATTTGTTGGTGCCTTGCCAAAGACATTGCAGGGACTGAGTGAGGTTGAAGTAATCTCTATTGCACATAACAAGCTTACAGGTTCTGTTCCAAAAAGTATCTGTAGTTTGCCTAATTTGGCGAACTTTACATTCTCCTATAACTATTTTAACGTCGAGGAAGAAGGTTGTGTGCCTCCTGGAAAAGAAATTGAGTTGGAAGACATGGATAATTGTATACCTAATAGGCCAAAACAAAAGACAACAAATGATTGCAATGTGGTTATAAGCAAACCTGTGGATTGCACCAAGGGATTATGTAGTAGTAAACCATCTCAATCCAATTCTCCTTCAAATCCTCCAACTGAGAAACCAACACCTTCAGTGCCTAAGCCACAACCGCAACCTACACCTTCGCAAACCCCAACACCATCGACACCAAAGCCAACACCAAGTCCACAACCTAAACCAACACCATCCAGTCCACCACCAACCCCTTCTACACCTGAAGCAGAACCACCAATTGAGGATGATCCTCATAATGAAGCACCCAAAAGAAGAACACGATCACCGCCGCCACCAGTTCAATCCTCACCACCTCCTGTGCATTCTCCTTCACCACCAGTTCATTCACCACCTCCACCGGTTCACTCACCTCCTCCACCAGTACATTCACCACCACCACCAGTGCACTCTCCACCACCTCCCGTTCACTCACCTCCTCCACCAGTTCACTCCCCACCACCACCAGTTCATTCTCCACCACCACCTGTTCACTCACCTCCTCCGCCACCAGTACACTCTCCACCACCACCAGTTCATTCACCTCCTCCACCAGTACATTCTCCACCACCACCGGTTCATTCCCCTCCTCCTCCACCAGTACATTCTCCACCACCACCGGTTCATTCACCTCCTCCACCAGTACATTCTCCACCACCACCGGTTCATTCCCCTCCTCCACCAGTACATTCTCCACCACCACCAGTTCATTCACCTCCTCCACCAGTACACTCTCCACCACCACCCGTTCACTCACCTCCTCCACCCGTTTTCTCACCACCACCACCTGTCCACTCTCCACCTCCACCAACTGCATCACCTCCTCCTCCTGTTAATGCACCACCTCCAGAAGATGATATCATTTTACCCCCTCACTTTGGCTCTTCATATGCTTCACCTCCTCCACCAATCATTGCTGGTTACTAA 2058 0.4363 MQVQGWFLLFSFFLFSPTSFFSHAISNEEAASIARRQMLHLQENEDLPENYVDTYKTDLKFPNPNLKSAYIALQAWKKAIYSDPTNFTSNWEGPNVCSYNGIFCAASLNDSKIQVVAGIDLNQADIAGYIPAEFGLLADIALLHINSNRFCGVLPKSFSKLKLLHELDISNNRFVGKFPCHVLSIPDIKFIDIRFNEFEGEIPPELFNKTLDAIFINNNRFTSTIPENMGNSPASVIVFANNGISGCIPSSIGQMKNLNEFVVIGNNLTGCLPEDIGKLQQLAVFDVSENLFVGALPKTLQGLSEVEVISIAHNKLTGSVPKSICSLPNLANFTFSYNYFNVEEEGCVPPGKEIELEDMDNCIPNRPKQKTTNDCNVVISKPVDCTKGLCSSKPSQSNSPSNPPTEKPTPSVPKPQPQPTPSQTPTPSTPKPTPSPQPKPTPSSPPPTPSTPEAEPPIEDDPHNEAPKRRTRSPPPPVQSSPPPVHSPSPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVFSPPPPVHSPPPPTASPPPPVNAPPPEDDIILPPHFGSSYASPPPPIIAGY* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3601 685 MobiDBLite consensus disorder prediction 389 685 - -
Mtr3g3601 685 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 414 575 - -
Mtr3g3601 685 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 545 682 - -
Mtr3g3601 685 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 6 393 - -
Mtr3g3601 685 MobiDBLite consensus disorder prediction 471 665 - -
Mtr3g3601 685 Gene3D Ribonuclease Inhibitor 237 366 IPR032675 -
Mtr3g3601 685 MobiDBLite consensus disorder prediction 456 470 - -
Mtr3g3601 685 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 6 393 - -
Mtr3g3601 685 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 545 682 - -
Mtr3g3601 685 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 414 575 - -
Mtr3g3601 685 MobiDBLite consensus disorder prediction 401 455 - -
Mtr3g3601 685 Pfam Leucine rich repeat N-terminal domain 70 104 IPR013210 -
Mtr3g3601 685 Gene3D Ribonuclease Inhibitor 68 236 IPR032675 -
Mtr3g3601 685 SUPERFAMILY L domain-like 70 342 - -
Mtr3g3601 685 PRINTS Proline rich extensin signature 399 420 - -
Mtr3g3601 685 PRINTS Proline rich extensin signature 421 437 - -
Mtr3g3601 685 PRINTS Proline rich extensin signature 439 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3601 Mtr-Chr3 49907146 49909395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3601 24 518 Trihelix Transcription Factor Family AT2G15880 51.703 1.84e-166 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3601 - - gmx:121175033 578.17