Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3592 ATGGCACCAAGTTTTGATTGTGTTTCTAGCCTTCTTTGCACTGAGGAAGATAGCAGTGTTTTTGATGATGCTGAATATGGTGGTGGTGGTTCGGTGGAGGTGTACGGGGATTCGTGGCGTCCTAGGAATGATCATCAGATGACTCAACAACGTTATGATGGTGTTCCTGATGAGTTGCCATTGCAGAGTGAAGAGTGTTTGGTTCTGATGTTGGAAAAAGAGTGTCAGCAATGGCCTGGTGCTGATTATCTGAATAAGTTGCGGTTTGGAGATTTGGATTTTGAGGCTAGAAATGAAGTCATCGATTGGATTCAAAAGGTTCGAGCACATTTCGGTTTTGGTCCTCTTTGTGCTTATCTATCCATTAATTACATGGATCGTTTCCTTTCTGTATATGAATTCCCTAAGGGAAGAGCTTGGACAATGCAATTGTTGGCTGTAGCTTGCTTATCTTTGGCAGCTAAAGTAGAGGAAACTGCTGTTCCTCAGCCTCTTGATTTGCAGATTGGTGAATCCAAGTTTGTATTTGAAGCTAAAACCATACAGAGAATGGAGCTTCTAGTACTCAGCACATTGAAGTGGAGAATGCAAGCAATTACTCCATTCTCCTTCATTGAATGTTTCCTTTCTAAGATTAAAGATGATGATAAGAGTTCATTAAGTTCTTCAATTTCGCGATCAACTCAACTTATATCAAGCACCATCAAAGGTCTTGACTTCTTGGAATTCAAACCATCAGAGATTGCAGCAGCTGTGGCAACATGTGTTGTTGGGGAAACCCAAGCAATTGATAGTAGCAAATCAATTTCCACTCTGATTCAATACGTAGAAAAGGGGAGATTATTGAAGTGTGTTGGAAAGGTCCAAGAGATGTCATTGAACAGTGTGTTCACTGGCAAGGATTCAAGTGCATCTTCTGTCCCTAGTGTGCCTCAAAGCCCAATGGGTGTGTTGGATACATTGTGCTTCAGCTACAAAAGTGATGACACCAATGCTGGTGGTGGTGGTTCATGTTCTTCTTCACATAGTAGTAGCCCAGATGCTAAAAGGAGGAAGCTAAACAAAACCTGTGGATCAGAGCTTTTGTAG 1089 0.4169 MAPSFDCVSSLLCTEEDSSVFDDAEYGGGGSVEVYGDSWRPRNDHQMTQQRYDGVPDELPLQSEECLVLMLEKECQQWPGADYLNKLRFGDLDFEARNEVIDWIQKVRAHFGFGPLCAYLSINYMDRFLSVYEFPKGRAWTMQLLAVACLSLAAKVEETAVPQPLDLQIGESKFVFEAKTIQRMELLVLSTLKWRMQAITPFSFIECFLSKIKDDDKSSLSSSISRSTQLISSTIKGLDFLEFKPSEIAAAVATCVVGETQAIDSSKSISTLIQYVEKGRLLKCVGKVQEMSLNSVFTGKDSSASSVPSVPQSPMGVLDTLCFSYKSDDTNAGGGGSCSSSHSSSPDAKRRKLNKTCGSELL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3592 362 MobiDBLite consensus disorder prediction 330 344 - -
Mtr3g3592 362 SMART Cyclin_C_2 199 324 IPR004367 -
Mtr3g3592 362 CDD CYCLIN 97 189 IPR013763 -
Mtr3g3592 362 Gene3D - 70 285 - -
Mtr3g3592 362 PANTHER CYCLINS 1 355 IPR039361 -
Mtr3g3592 362 SUPERFAMILY Cyclin-like 181 288 IPR036915 -
Mtr3g3592 362 MobiDBLite consensus disorder prediction 345 362 - -
Mtr3g3592 362 SMART cyclin_7 102 190 IPR013763 -
Mtr3g3592 362 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 355 - -
Mtr3g3592 362 Pfam Cyclin, N-terminal domain 69 196 IPR006671 -
Mtr3g3592 362 SUPERFAMILY Cyclin-like 61 196 IPR036915 -
Mtr3g3592 362 MobiDBLite consensus disorder prediction 330 362 - -
Mtr3g3592 362 Pfam Cyclin, C-terminal domain 199 295 IPR004367 -
Mtr3g3592 362 Gene3D - 80 197 - -
Mtr3g3592 362 ProSitePatterns Cyclins signature. 97 128 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3592 Mtr-Chr3 49793289 49796297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3592 26 329 Core Cell Cycle Gene Families AT2G22490 44.051 1.62e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3592 K18810 - gmx:547739 429.483