Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3590 ATGGGTTATCTTTTTTGCAATGCAGAGTCTGCAATTGCAACCTGCGATCCACACTATTGGGATCTCAAAAAAAGAAGCAAAACATTAACAACAAATCGTACACACATTATCAAAGAGTTTCTTTACACCGACCTCGTCACCGCCACGGATAGTTTCTCTGCCGAAAGCTACCTCGGCAAAGGTAGCCACGGCAGAGTTTACAAAGCAAAGTTAAACGGCGACAAGGATAACATAGTTGTCGCCGTTAAAACTACAAAGCTAACTACAAAAAGCAAACATAGTCACATCAACGGCAACAACAAAAATTGCACTGGTTGTGGTAATTGTACAAGTCCAGCAGAAAACGAGATCGAGATTCTTTCACAAGTTCCAAATCCTCGTCTCGTAAATCTCATAGGATACTGCACCGACCCAAACGGCAATAAATTAATTGTCGTTGAATACATGCCAAACGGTTCACTTCATGATTTATTACACTCTTCATCTAAACCACCCGGTTGGACCAGACGTTTCCGGTTCGCATTACAAGTTGCAAAAGCGGTTCGAACCTTACACGGTTCAAATCCTCCGGTTATTCACCGTGATATTAAATCCTCCAACGTTTTGATCGATCAAGATTTCAAAGCGAGACTCGGTGATTTCGGTTTAGCGCTAAGAGGACACGTGGAAGACGTTCGTGTAAAGTGCACACCACCGGCGGGTACGTTAGGGTATCTTGATCCATGCTATCTTGCACCGGAGGATCTTAGCGCGAAGAGTGATGTGTTCAGTTTTGGGATCTTGTTATTGGAGATTATCAGTGGAAGAAATGCGATTGATGTTAATTATAGTCCTCCTTCAGTGGTGGATTGGGCGGTGCCGTTGATTAGAAAAGGTGATTTCGTCGGGATCTGTGATCGGAGAATTGGTGCACCTTCGGATTTGGTTATGTTGCGGCAGATTGCCGTGATTGCGGCGAGATGTGTTAGATCAACGGCGGAGAAACGGCCGGGGATGGTGGAGGTTGTTGAGTGTTTGAAATTGGCTAGGAAGAGGTTTCATTCGTCGCCGATTTGGTGTAGTTGGAGACGGCGCGTGACGCGTGTGGAGAACGCGCAACCGTTGATGAGATGTGAAGACTATGATAATGATAATGATTATGATTATCGTAATAATAATTATTATGATTGGGATGATGATGAAGATGATAATAAAAGTGAGAATGTTGTGAAGATTGTTAAGAGTGGGAGCAGTAGAAGGAAGAGTAAAGTATCAAGTGTGGCGAGCGTAGAGTATGAGAGTAAACCGTTGAAGAAAGGAGCGAGATCTAAGCCGTCGAAGAAAGTAACGAGATCTAAAACCGTTGGATCATCTTCTGGGTTTGTTAGTAGTTGCAGTAGAATGAGTGGGATTCAAATGGTTACAGAGAAAACGGGTGTAATGAAGTTGAAAAAGTCAAAGTCAATGGGAGTCTTGCAAAGTCCTAATTTGGGTGAGGATGAGACAATGATAGCAATGTGGAAGTTGGTGATTAGAGATAATAAGAAATTGGAAAAGAAGATGTTAGAAAAACCTTTGGTTAATAAGCATGGTTGGGAATCAGAATAA 1587 0.426 MGYLFCNAESAIATCDPHYWDLKKRSKTLTTNRTHIIKEFLYTDLVTATDSFSAESYLGKGSHGRVYKAKLNGDKDNIVVAVKTTKLTTKSKHSHINGNNKNCTGCGNCTSPAENEIEILSQVPNPRLVNLIGYCTDPNGNKLIVVEYMPNGSLHDLLHSSSKPPGWTRRFRFALQVAKAVRTLHGSNPPVIHRDIKSSNVLIDQDFKARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPEDLSAKSDVFSFGILLLEIISGRNAIDVNYSPPSVVDWAVPLIRKGDFVGICDRRIGAPSDLVMLRQIAVIAARCVRSTAEKRPGMVEVVECLKLARKRFHSSPIWCSWRRRVTRVENAQPLMRCEDYDNDNDYDYRNNNYYDWDDDEDDNKSENVVKIVKSGSSRRKSKVSSVASVEYESKPLKKGARSKPSKKVTRSKTVGSSSGFVSSCSRMSGIQMVTEKTGVMKLKKSKSMGVLQSPNLGEDETMIAMWKLVIRDNKKLEKKMLEKPLVNKHGWESE* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3590 528 Gene3D Transferase(Phosphotransferase) domain 1 149 351 - -
Mtr3g3590 528 Pfam Protein tyrosine and serine/threonine kinase 55 339 IPR001245 GO:0004672|GO:0006468
Mtr3g3590 528 MobiDBLite consensus disorder prediction 427 454 - -
Mtr3g3590 528 ProSiteProfiles Protein kinase domain profile. 52 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3590 528 PANTHER - 1 514 - -
Mtr3g3590 528 ProSitePatterns Protein kinases ATP-binding region signature. 58 83 IPR017441 GO:0005524
Mtr3g3590 528 SUPERFAMILY Protein kinase-like (PK-like) 30 339 IPR011009 -
Mtr3g3590 528 PANTHER OS01G0750732 PROTEIN 1 514 - -
Mtr3g3590 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Mtr3g3590 528 SMART serkin_6 52 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3590 528 Gene3D Phosphorylase Kinase; domain 1 22 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3590 Mtr-Chr3 49766348 49768454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3590 40 350 Receptor kinase-like Gene Family AT3G59420 41.456 1.11e-67 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mtr3g3590 PK_Tyr_Ser-Thr 3.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3590 - - cam:101503747 728.783