Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3577 ATGGCAATGCTTAGGCTTAGTTCACATCAGAATCAGAATGGTAATATTCTTATTACCAGAACCTTGTTTAAGATGATTATAATATTTGTTCTAGCAATATTTCTATTGTTACAAAATTCATCCACCAACCTTGTTTTTGCTACATCTCAATTCAATATTGTGAAGTATCTTCCTGGTTTTCAAGGACCCCTTCCCTTTGTACTAGAAACTGGGTATGTGGGAGTGGGTGAAACTGAAACAGATGAAAATTCCGCGGAATTGTTCTACTATTTTTTAGAGTCTGAGAATAATCCTAAACAAGATCCTCTCTTGCTTTGGTTAACTGGTGGTCCTGGTTGCTCTGCTTTTTCTGGCCTTGCCTTTGAAATAGGTCCAATAACGTTTAAAAATGAGGAATACAACGGGAGCTTACCAAATTTGATCTTGAGGCCACATTCATGGACAAAGGTAAGTAATATTATATTTTTGGATTTGCCTGTGGGTACTGGATTCTCTTATCCCAAAACAGAAGGTGCTGCTCAGCAAAGCACTTGGAAGCTAGTTCACAATGCTCATCAATTTCTTAGGAAGTGGCTCATTGATCATCCAAAATTTATCTCAAATGAAGTGTACATTGCTGGTGACTCGTACTCAGGAAACGAAGGGGGCCTTCAACCGTGGATAAACCTTCAGACTATATCAGGAGTCTATGAAGTTCATATTTTGGAATCGAAATGCGAGTTTGGTTTACCTAATCCATTGGAAGCCAATGGTAGGAGGAGACTTCTTATTCACAAGGCCAACACCATCTTTACTTCTTCTCTTACATTGCCACCTTTAAACTGTCGGAGTCATGCATATTTCCTCGGTGCGTATTGGGCCAACGACGCTAATGTTCAAAATGCATTGCACATTCGAAAGGGAAGTATAGGAAAATGGAAGCGTTGTAACTTTGACATACCCTTCAAGCACGAAATAGATAACAGCTTTGAGTATCATGTAAATCTTAGCAGAAAAGGCTATCGTTCATTAATATACAGTGGGGATCATGACATGAAAGTTCCATTTGTGGCAACTCAAGCATGGATAAGATCTTTAAACTATTCCATTGTTGATGATTGGAGGCAGTGGTATTCTAATTCTCAAGTAGCAGGATATACTAGGACTTACTCAAATCGGATGACATTTGCAACTGTGAAGGGTGCAGGACATACGGCTCCAGAGTACAAACGTGAAGAATGCTTAGCCATGTTGAGTAGGTGGATATCTAATAACCCACTCTAG 1263 0.3927 MAMLRLSSHQNQNGNILITRTLFKMIIIFVLAIFLLLQNSSTNLVFATSQFNIVKYLPGFQGPLPFVLETGYVGVGETETDENSAELFYYFLESENNPKQDPLLLWLTGGPGCSAFSGLAFEIGPITFKNEEYNGSLPNLILRPHSWTKVSNIIFLDLPVGTGFSYPKTEGAAQQSTWKLVHNAHQFLRKWLIDHPKFISNEVYIAGDSYSGNEGGLQPWINLQTISGVYEVHILESKCEFGLPNPLEANGRRRLLIHKANTIFTSSLTLPPLNCRSHAYFLGAYWANDANVQNALHIRKGSIGKWKRCNFDIPFKHEIDNSFEYHVNLSRKGYRSLIYSGDHDMKVPFVATQAWIRSLNYSIVDDWRQWYSNSQVAGYTRTYSNRMTFATVKGAGHTAPEYKREECLAMLSRWISNNPL* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3577 420 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 212 IPR001563 GO:0004185|GO:0006508
Mtr3g3577 420 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 225 418 IPR001563 GO:0004185|GO:0006508
Mtr3g3577 420 SUPERFAMILY alpha/beta-Hydrolases 54 419 IPR029058 -
Mtr3g3577 420 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 28 212 - -
Mtr3g3577 420 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 225 418 - -
Mtr3g3577 420 PRINTS Carboxypeptidase C serine protease (S10) family signature 143 155 IPR001563 GO:0004185|GO:0006508
Mtr3g3577 420 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 166 IPR001563 GO:0004185|GO:0006508
Mtr3g3577 420 PRINTS Carboxypeptidase C serine protease (S10) family signature 191 216 IPR001563 GO:0004185|GO:0006508
Mtr3g3577 420 PRINTS Carboxypeptidase C serine protease (S10) family signature 387 400 IPR001563 GO:0004185|GO:0006508
Mtr3g3577 420 Pfam Serine carboxypeptidase 284 417 IPR001563 GO:0004185|GO:0006508
Mtr3g3577 420 Pfam Serine carboxypeptidase 58 213 IPR001563 GO:0004185|GO:0006508
Mtr3g3577 420 Gene3D alpha/beta hydrolase 47 225 IPR029058 -
Mtr3g3577 420 Gene3D alpha/beta hydrolase 247 420 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3577 Mtr-Chr3 49628668 49638525 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3577 52 77 Calmodulin-binding Proteins AT2G22960 69.231 1.32e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3577 K16296 - gmx:100801015 520.776