Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3572 ATGTTACATGATCTTATACTTCAGTTAAATTCAACAATGGCATATTCAGGATCAATTCGATTGTCTCATGACTTTAGGCAATATATTAGTAATGGAAGCTGTAGTTTTTGTCATAAACCTAATTCCGGTAATCGATTATGTTTTGTTGCCTTCAATCATCAACGGCATGGTTTGAGGGTTGATTCTTCAGCACTCATCTTTTCAAGATTACATGTCCAAGTTAAGCCTGTACCTTCTAGATGTAATGTTTTGTTGTGTCAGTCTGCCCTGGTACCGGCTGGAGGGTGTGAGGCTCCGCTGTTGAAAGTGGCTACTGTTTCTTTGGCAAGGTCATGTAATGCTATATCAGGAAGACCAATTATGCTTCAATTAATCCCCGCTCTTGGTATAATTGGCTTTGCTATCTTTGGTCTTGAACCTCTCCTACGCCGTTGCAGGGCTCTTTTTCTCCAAGAATGGAACGATAAAAGTTGGAAGAAAAGTATTTCACGTTATATAATGACATCTTATTTCCAACCTTTGCTGCTGTGGACTGGGGTAATGCTGCTCTGCAGGGGCTTAGATCCACTAGTCGTACAATCAAAAACCAGTCCGATTTTAAAGCAACGGCTGCTGAATTTTGTCAGATCTTTTTCAACCGTGCTTACATTTGCCTACTGTTCTTCAAGCTTTGTTCGACAAGCACAAAATTTCTGTATGGAGACAAATGCCGACAACAATGAAAGAAAAATGAGCATTGATCTTATTGGGAAAGCTGTATATACTGCAGTATGGGTTGCTGCCGTAACATTGTTCATGGAGTTGTTGGGTCTCTCTGCACAGAAGTGGTTGGCTGCTGGTGGTATGGGTACAGTACTGCTTTCACTTGCAGGCCGTGAGATATTCACGAACTTCCTTTCAAGTGTGATGATTCATGCAACTCGGCCATTTGTTGTGAATGAGCGGATTAAAACAAAGATTAAAGGATACGAAGTTTCTGGTAGAGTTGAGCATGTAGGCTGGTGGTCACCAACAGTAGTTAGAGGTGCTGATTGTGAAGCAGTTCACATTCCTAATCACAAGTTGAGTGTAAATGTTGTGAGGAATCTTAGTAAGAAAACTCATTGGCGCATCAAAACTCACCTTGCTATCAGTCACTTGGATGTCAACAAGATTGATACCATCATAGCTGATATGCGCAAGGTTTTGGCAAAAAATCCTCTAGTAGAACAAAAAAAATTGCACAGAAGGGTTTTCCTGGAGGATGTCAATCCAGAAAATCAAGCTCTTATGATATTAGTATCTTGCTTTGTCAAAACTTCACATTCTGAAGAGTACCTCCGTGTTAAGGAGGCCATTCTCTTGGATCTTCTTAGAGTCATCAGTCATCATGGAGCTCGGCTAGCAACACCCATCCGCACAATTCAGAAGATGTACAGTGATTCTGATTTAGAAATTGATCCATTTGACGATGCCATTTTCACTCGTTCGAGAGCAAAGGGAAACCACCCTTTCCCATTCACAAACTCACCTTATAAAGCTAAGCCTTCAACTCAATCAACTACTGTAAATGATGAGAAAGATGTCAAGATTCGTGAAACCTTGATAACTGGTTTCAAAGATGAAGGTGAAAAAATTGCCGCAACATGGACCCCCTCATCCAGTGTAAAGTCCCAGGATAAGTTAAAGTCAACATCTAAAGCTAAGACCCGGAATGTGGCTTCTGAATCTTCTGATAATCCAGTTCAGAAGGCCTCTAAATCAGAAACATCACCCCAAATTTTGTTATCATCTAACGAGTCTTCACCATCAAAGAAAGATGAAGAAAAATGA 1812 0.4056 MLHDLILQLNSTMAYSGSIRLSHDFRQYISNGSCSFCHKPNSGNRLCFVAFNHQRHGLRVDSSALIFSRLHVQVKPVPSRCNVLLCQSALVPAGGCEAPLLKVATVSLARSCNAISGRPIMLQLIPALGIIGFAIFGLEPLLRRCRALFLQEWNDKSWKKSISRYIMTSYFQPLLLWTGVMLLCRGLDPLVVQSKTSPILKQRLLNFVRSFSTVLTFAYCSSSFVRQAQNFCMETNADNNERKMSIDLIGKAVYTAVWVAAVTLFMELLGLSAQKWLAAGGMGTVLLSLAGREIFTNFLSSVMIHATRPFVVNERIKTKIKGYEVSGRVEHVGWWSPTVVRGADCEAVHIPNHKLSVNVVRNLSKKTHWRIKTHLAISHLDVNKIDTIIADMRKVLAKNPLVEQKKLHRRVFLEDVNPENQALMILVSCFVKTSHSEEYLRVKEAILLDLLRVISHHGARLATPIRTIQKMYSDSDLEIDPFDDAIFTRSRAKGNHPFPFTNSPYKAKPSTQSTTVNDEKDVKIRETLITGFKDEGEKIAATWTPSSSVKSQDKLKSTSKAKTRNVASESSDNPVQKASKSETSPQILLSSNESSPSKKDEEK* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3572 603 Pfam Mechanosensitive ion channel 251 460 IPR006685 GO:0016020|GO:0055085
Mtr3g3572 603 SUPERFAMILY Sm-like ribonucleoproteins 294 364 IPR010920 -
Mtr3g3572 603 Gene3D - 206 308 - -
Mtr3g3572 603 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 13 603 - -
Mtr3g3572 603 MobiDBLite consensus disorder prediction 561 594 - -
Mtr3g3572 603 MobiDBLite consensus disorder prediction 495 519 - -
Mtr3g3572 603 Gene3D - 309 362 IPR023408 -
Mtr3g3572 603 MobiDBLite consensus disorder prediction 543 603 - -
Mtr3g3572 603 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 13 603 IPR045042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3572 Mtr-Chr3 49579538 49585561 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3572 13 582 Mechanosensitive Ion Channel Family AT1G58200 51.282 0.0 582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3572 3 49579538 49585561 Mtr3g3572 3 49579538 49585561 ECH