Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3569 ATGAACTTGTGCTTCAAGTCTTCAATTTCAACAATGGCGTACCCAGGTTCTATGCAATTTTCTCGTGACGTTAGGCTCAAAACTAGTAACAATGGACCCCGTAGTTTTCAGCATCATAATCCCGCACGGGTTGGAAGATTACATTTAGTCACCACGAATCTTTTACCGCGCACTTTGAAGCAAGATTCTTTGTCACACCATCTTTTACGCATAAGGCATGCACCTTCCAGGTGCAGTGTTTTTGTATGTCGGTCTGCCATCCTACCGGGTGGTGGAGGGAGTGGGACTGCACTCATAAAATCTGCTAGTGTTCTTTTAACAAGATATTTATGTAGGTCATATGATTCTTTATTGGGAAGCCCTATTTTGCTTCGATTGATTCCAGCCCTTGGTATTATTGCCTTTGCTGTTTATGGGATTGAGCCACTACTTCGTCTCAGCAGGATTCTATTTTTTCAAAGGACTGACAGCAGTTGGAAGAAAAGTAGTTCGCGATATGTCATGACATCTTATTTTCAGCCATTATTATTGTGGACTGGGGCAATGCTCATATGCAGGGCATTAGATCCTATAATCCTGCCATCTCAGACTAGTCAGGTCGTTAAGCAACGGCTGCTTAATTTTGTGAGATCTTTGTCAACCGTAATTTCATTTGCTTACTGTTTATCAAGCTTAATTCAACAAGCTCAAAAATTCTTTCTGGATGCAAATGAATCCAGTGATGCAAGAAATATGGGCCTTGATTTTGCTGGGAAAGCCATATACACTGCTGTTTGGGTTGCTGCTGTGTCATTATTCATGGAGTTGCTAGGTTTCTCCACACAGAAGTGGTTAACTGCTGGTGGTTTGGGCACAGTATTGCTCACTCTTGCCGGTCGAGAGATATTTACGAACTTCCTTTCAAGTATAATGATCCATACAACTCGGCCATTTGTATTGAATGAGTGGATTCAAACAAAGATTGAGGGATATGAGGTTTCTGGCACAGTTGAGCATGTGGGCTGGTGGTCACCAACTATTATTAGAGGTGATGATCGTGAGGCAGTTCATATTCCTAATCACAAGTTCACTGTCAATGTTGTGAGAAATCTGACTCAGAAATCTCATTGGCGTATCAAGAGTTACATTTCTATCAGTCACTTGGATGTTAACAAAATTAATAATATTGTAGCTGATATGCGCAAGGTTTTGGCTAAAAATCCTCAAGTGGAGCAACAGAAATTGCACAGAAGGGTCTTTTTGGAAGACATTAATCCTGAAAACACAGCTCTAAAGATATTGATATCATGCTTTGTGAAAACTTCACATTTTGAGGAGTACCTTTGTGTTAAGGAGGCAATCCTTTTGGATCTTCTCAGAGTTGTCAGTCATCATCGAGCCCGGTTAGCCACTCCCATCCGGACAGTTCAGAAAATATACAGTGAGCCTGCCTCGGAAAATATACCCTTTGGGGATTCCATTTTCACTCGATCCAGAGCAGCAGTGAATCGCCCGTTCCTACTAATAGAACCACCGTATAAAGTTAATGGTGAAGATAAAGCCAAGCCGTCAACTCGTTCAACTCGTGGCAATGAGGAAAAAGATGCCAAGGTTGATGAACCTGTGGCATCAGACTCCAAAAGTGATGAGAATTTTGCAGGAACATCAACTTCTCCATCTAGTGTAAACTCCAAGGATAAGTCCAAGTCAAAGTCTGATGCCCAAACCCAGAACATGGGTTCTGATAGTTCAGTGGAGAAGACCTCCAAAACAATGCAACCTAAAAAAGAAACTGCAGGAGATGTAGGAAAAGGAAGCACAATTCCTGTACCTAAAACCCCTGCGCATAGTGTTGTATCTGAAACTTTGCCTGTTATTACTAACCATGAGTCTAGCAGGGCAGACACTGCTTCTGCTACTTCTTCACAGTCAAAGCAAGATGAAGAGAAATCTTCGGTGCCATCATCAGCAGTTAGAACTCCCTTAGAAGAGAATATTCTTCTTGGGGTTGCACTTGAAGGCTCAAAAAGAACTCTTCCAATTGAGGAAGAAATGAATCCATCTCCTAACTCGGCTGAGTCACAAGAGTTTGCTGTCCAACGGAATGGGAATGGACCTCCTGCTAACAAAGATAAGAAGGATGGTCCAACCTCTTCATTTCCAAATGCTAAGCAAAATGACTAG 2163 0.4193 MNLCFKSSISTMAYPGSMQFSRDVRLKTSNNGPRSFQHHNPARVGRLHLVTTNLLPRTLKQDSLSHHLLRIRHAPSRCSVFVCRSAILPGGGGSGTALIKSASVLLTRYLCRSYDSLLGSPILLRLIPALGIIAFAVYGIEPLLRLSRILFFQRTDSSWKKSSSRYVMTSYFQPLLLWTGAMLICRALDPIILPSQTSQVVKQRLLNFVRSLSTVISFAYCLSSLIQQAQKFFLDANESSDARNMGLDFAGKAIYTAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSIMIHTTRPFVLNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLTQKSHWRIKSYISISHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLEDINPENTALKILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYSEPASENIPFGDSIFTRSRAAVNRPFLLIEPPYKVNGEDKAKPSTRSTRGNEEKDAKVDEPVASDSKSDENFAGTSTSPSSVNSKDKSKSKSDAQTQNMGSDSSVEKTSKTMQPKKETAGDVGKGSTIPVPKTPAHSVVSETLPVITNHESSRADTASATSSQSKQDEEKSSVPSSAVRTPLEENILLGVALEGSKRTLPIEEEMNPSPNSAESQEFAVQRNGNGPPANKDKKDGPTSSFPNAKQND* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3569 720 Pfam Mechanosensitive ion channel 252 459 IPR006685 GO:0016020|GO:0055085
Mtr3g3569 720 Gene3D - 206 309 - -
Mtr3g3569 720 Gene3D - 311 366 IPR023408 -
Mtr3g3569 720 SUPERFAMILY Sm-like ribonucleoproteins 295 365 IPR010920 -
Mtr3g3569 720 MobiDBLite consensus disorder prediction 508 539 - -
Mtr3g3569 720 MobiDBLite consensus disorder prediction 566 581 - -
Mtr3g3569 720 MobiDBLite consensus disorder prediction 541 558 - -
Mtr3g3569 720 MobiDBLite consensus disorder prediction 613 652 - -
Mtr3g3569 720 MobiDBLite consensus disorder prediction 507 720 - -
Mtr3g3569 720 MobiDBLite consensus disorder prediction 677 695 - -
Mtr3g3569 720 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 12 711 - -
Mtr3g3569 720 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 12 711 IPR045042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3569 Mtr-Chr3 49547586 49554737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3569 38 692 Mechanosensitive Ion Channel Family AT1G58200 55.111 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3569 K22047 - gmx:100796022 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3569 3 49547586 49554737 Mtr3g3569 3 49547586 49554737 ECH